Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17139 | 51640;51641;51642 | chr2:178610111;178610110;178610109 | chr2:179474838;179474837;179474836 |
N2AB | 15498 | 46717;46718;46719 | chr2:178610111;178610110;178610109 | chr2:179474838;179474837;179474836 |
N2A | 14571 | 43936;43937;43938 | chr2:178610111;178610110;178610109 | chr2:179474838;179474837;179474836 |
N2B | 8074 | 24445;24446;24447 | chr2:178610111;178610110;178610109 | chr2:179474838;179474837;179474836 |
Novex-1 | 8199 | 24820;24821;24822 | chr2:178610111;178610110;178610109 | chr2:179474838;179474837;179474836 |
Novex-2 | 8266 | 25021;25022;25023 | chr2:178610111;178610110;178610109 | chr2:179474838;179474837;179474836 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs758008217 | -0.369 | 0.056 | N | 0.47 | 0.07 | 0.218845423259 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.68E-05 | 0 |
V/L | rs758008217 | -0.369 | 0.056 | N | 0.47 | 0.07 | 0.218845423259 | gnomAD-4.0.0 | 7.53044E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.89778E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6684 | likely_pathogenic | 0.7356 | pathogenic | -1.859 | Destabilizing | 0.457 | N | 0.477 | neutral | N | 0.483162255 | None | None | N |
V/C | 0.8877 | likely_pathogenic | 0.8991 | pathogenic | -1.15 | Destabilizing | 0.989 | D | 0.769 | deleterious | None | None | None | None | N |
V/D | 0.9867 | likely_pathogenic | 0.9919 | pathogenic | -2.319 | Highly Destabilizing | 0.857 | D | 0.892 | deleterious | N | 0.502533957 | None | None | N |
V/E | 0.9417 | likely_pathogenic | 0.9552 | pathogenic | -2.089 | Highly Destabilizing | 0.888 | D | 0.865 | deleterious | None | None | None | None | N |
V/F | 0.5881 | likely_pathogenic | 0.6245 | pathogenic | -1.13 | Destabilizing | 0.747 | D | 0.785 | deleterious | N | 0.475528932 | None | None | N |
V/G | 0.902 | likely_pathogenic | 0.927 | pathogenic | -2.358 | Highly Destabilizing | 0.857 | D | 0.891 | deleterious | N | 0.502533957 | None | None | N |
V/H | 0.9745 | likely_pathogenic | 0.9797 | pathogenic | -1.914 | Destabilizing | 0.989 | D | 0.859 | deleterious | None | None | None | None | N |
V/I | 0.0749 | likely_benign | 0.0791 | benign | -0.462 | Destabilizing | 0.003 | N | 0.2 | neutral | N | 0.428952876 | None | None | N |
V/K | 0.956 | likely_pathogenic | 0.9656 | pathogenic | -1.511 | Destabilizing | 0.888 | D | 0.868 | deleterious | None | None | None | None | N |
V/L | 0.3603 | ambiguous | 0.4017 | ambiguous | -0.462 | Destabilizing | 0.056 | N | 0.47 | neutral | N | 0.491097413 | None | None | N |
V/M | 0.3276 | likely_benign | 0.3715 | ambiguous | -0.422 | Destabilizing | 0.797 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/N | 0.9436 | likely_pathogenic | 0.9649 | pathogenic | -1.872 | Destabilizing | 0.96 | D | 0.88 | deleterious | None | None | None | None | N |
V/P | 0.9921 | likely_pathogenic | 0.9933 | pathogenic | -0.903 | Destabilizing | 0.96 | D | 0.864 | deleterious | None | None | None | None | N |
V/Q | 0.9219 | likely_pathogenic | 0.9357 | pathogenic | -1.706 | Destabilizing | 0.96 | D | 0.86 | deleterious | None | None | None | None | N |
V/R | 0.9435 | likely_pathogenic | 0.954 | pathogenic | -1.407 | Destabilizing | 0.888 | D | 0.881 | deleterious | None | None | None | None | N |
V/S | 0.8675 | likely_pathogenic | 0.9146 | pathogenic | -2.452 | Highly Destabilizing | 0.888 | D | 0.839 | deleterious | None | None | None | None | N |
V/T | 0.6315 | likely_pathogenic | 0.6866 | pathogenic | -2.074 | Highly Destabilizing | 0.528 | D | 0.609 | neutral | None | None | None | None | N |
V/W | 0.9881 | likely_pathogenic | 0.9882 | pathogenic | -1.552 | Destabilizing | 0.989 | D | 0.82 | deleterious | None | None | None | None | N |
V/Y | 0.9385 | likely_pathogenic | 0.9465 | pathogenic | -1.142 | Destabilizing | 0.888 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.