Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17157 | 51694;51695;51696 | chr2:178609954;178609953;178609952 | chr2:179474681;179474680;179474679 |
N2AB | 15516 | 46771;46772;46773 | chr2:178609954;178609953;178609952 | chr2:179474681;179474680;179474679 |
N2A | 14589 | 43990;43991;43992 | chr2:178609954;178609953;178609952 | chr2:179474681;179474680;179474679 |
N2B | 8092 | 24499;24500;24501 | chr2:178609954;178609953;178609952 | chr2:179474681;179474680;179474679 |
Novex-1 | 8217 | 24874;24875;24876 | chr2:178609954;178609953;178609952 | chr2:179474681;179474680;179474679 |
Novex-2 | 8284 | 25075;25076;25077 | chr2:178609954;178609953;178609952 | chr2:179474681;179474680;179474679 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | None | None | 0.999 | N | 0.552 | 0.406 | 0.33110744837 | gnomAD-4.0.0 | 6.84676E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99913E-07 | 0 | 0 |
H/R | None | None | 0.999 | N | 0.483 | 0.272 | 0.319970858106 | gnomAD-4.0.0 | 1.3693E-06 | None | None | None | None | N | None | 5.98767E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/Y | None | None | 0.4 | N | 0.243 | 0.245 | 0.238096912614 | gnomAD-4.0.0 | 3.42338E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79983E-06 | 1.16031E-05 | 3.31664E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4257 | ambiguous | 0.4252 | ambiguous | 0.068 | Stabilizing | 0.993 | D | 0.549 | neutral | None | None | None | None | N |
H/C | 0.2359 | likely_benign | 0.218 | benign | 0.73 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
H/D | 0.4199 | ambiguous | 0.4098 | ambiguous | -0.068 | Destabilizing | 0.999 | D | 0.552 | neutral | N | 0.436324352 | None | None | N |
H/E | 0.4272 | ambiguous | 0.3978 | ambiguous | -0.026 | Destabilizing | 0.998 | D | 0.491 | neutral | None | None | None | None | N |
H/F | 0.3807 | ambiguous | 0.3146 | benign | 0.817 | Stabilizing | 0.991 | D | 0.55 | neutral | None | None | None | None | N |
H/G | 0.5016 | ambiguous | 0.5001 | ambiguous | -0.249 | Destabilizing | 0.998 | D | 0.546 | neutral | None | None | None | None | N |
H/I | 0.3574 | ambiguous | 0.3238 | benign | 0.897 | Stabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
H/K | 0.3187 | likely_benign | 0.2966 | benign | 0.008 | Stabilizing | 0.998 | D | 0.539 | neutral | None | None | None | None | N |
H/L | 0.1497 | likely_benign | 0.1336 | benign | 0.897 | Stabilizing | 0.98 | D | 0.569 | neutral | N | 0.3921495 | None | None | N |
H/M | 0.4672 | ambiguous | 0.4598 | ambiguous | 0.734 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
H/N | 0.1697 | likely_benign | 0.1697 | benign | 0.099 | Stabilizing | 0.997 | D | 0.516 | neutral | N | 0.457585059 | None | None | N |
H/P | 0.7657 | likely_pathogenic | 0.7593 | pathogenic | 0.646 | Stabilizing | 0.999 | D | 0.663 | neutral | N | 0.42847566 | None | None | N |
H/Q | 0.2326 | likely_benign | 0.2216 | benign | 0.251 | Stabilizing | 0.999 | D | 0.507 | neutral | N | 0.445194551 | None | None | N |
H/R | 0.1488 | likely_benign | 0.1344 | benign | -0.652 | Destabilizing | 0.999 | D | 0.483 | neutral | N | 0.452581884 | None | None | N |
H/S | 0.3227 | likely_benign | 0.329 | benign | 0.203 | Stabilizing | 0.993 | D | 0.554 | neutral | None | None | None | None | N |
H/T | 0.338 | likely_benign | 0.3405 | ambiguous | 0.342 | Stabilizing | 0.998 | D | 0.587 | neutral | None | None | None | None | N |
H/V | 0.2907 | likely_benign | 0.2713 | benign | 0.646 | Stabilizing | 0.996 | D | 0.59 | neutral | None | None | None | None | N |
H/W | 0.4702 | ambiguous | 0.4204 | ambiguous | 0.855 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
H/Y | 0.1476 | likely_benign | 0.1169 | benign | 1.123 | Stabilizing | 0.4 | N | 0.243 | neutral | N | 0.472650512 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.