Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17189 | 51790;51791;51792 | chr2:178609858;178609857;178609856 | chr2:179474585;179474584;179474583 |
N2AB | 15548 | 46867;46868;46869 | chr2:178609858;178609857;178609856 | chr2:179474585;179474584;179474583 |
N2A | 14621 | 44086;44087;44088 | chr2:178609858;178609857;178609856 | chr2:179474585;179474584;179474583 |
N2B | 8124 | 24595;24596;24597 | chr2:178609858;178609857;178609856 | chr2:179474585;179474584;179474583 |
Novex-1 | 8249 | 24970;24971;24972 | chr2:178609858;178609857;178609856 | chr2:179474585;179474584;179474583 |
Novex-2 | 8316 | 25171;25172;25173 | chr2:178609858;178609857;178609856 | chr2:179474585;179474584;179474583 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs727503618 | 0.247 | 0.999 | N | 0.697 | 0.421 | 0.399449838166 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4291 | ambiguous | 0.3709 | ambiguous | 0.021 | Stabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
K/C | 0.849 | likely_pathogenic | 0.7963 | pathogenic | -0.152 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
K/D | 0.7517 | likely_pathogenic | 0.6686 | pathogenic | 0.081 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/E | 0.2904 | likely_benign | 0.2379 | benign | 0.099 | Stabilizing | 0.999 | D | 0.697 | prob.neutral | N | 0.480096559 | None | None | N |
K/F | 0.8929 | likely_pathogenic | 0.8252 | pathogenic | -0.106 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
K/G | 0.6542 | likely_pathogenic | 0.5718 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/H | 0.4882 | ambiguous | 0.4259 | ambiguous | -0.47 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
K/I | 0.4695 | ambiguous | 0.3844 | ambiguous | 0.528 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/L | 0.527 | ambiguous | 0.4425 | ambiguous | 0.528 | Stabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/M | 0.41 | ambiguous | 0.3432 | ambiguous | 0.25 | Stabilizing | 1.0 | D | 0.609 | neutral | N | 0.482284244 | None | None | N |
K/N | 0.6574 | likely_pathogenic | 0.5704 | pathogenic | 0.259 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.521868611 | None | None | N |
K/P | 0.7316 | likely_pathogenic | 0.6698 | pathogenic | 0.388 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
K/Q | 0.2146 | likely_benign | 0.1895 | benign | 0.105 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.469660491 | None | None | N |
K/R | 0.0912 | likely_benign | 0.0879 | benign | -0.054 | Destabilizing | 0.999 | D | 0.608 | neutral | N | 0.521521894 | None | None | N |
K/S | 0.5874 | likely_pathogenic | 0.5088 | ambiguous | -0.222 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/T | 0.336 | likely_benign | 0.2776 | benign | -0.05 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.4843103 | None | None | N |
K/V | 0.4041 | ambiguous | 0.3392 | benign | 0.388 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
K/W | 0.8849 | likely_pathogenic | 0.8222 | pathogenic | -0.119 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
K/Y | 0.8088 | likely_pathogenic | 0.721 | pathogenic | 0.225 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.