Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17191 | 51796;51797;51798 | chr2:178609852;178609851;178609850 | chr2:179474579;179474578;179474577 |
N2AB | 15550 | 46873;46874;46875 | chr2:178609852;178609851;178609850 | chr2:179474579;179474578;179474577 |
N2A | 14623 | 44092;44093;44094 | chr2:178609852;178609851;178609850 | chr2:179474579;179474578;179474577 |
N2B | 8126 | 24601;24602;24603 | chr2:178609852;178609851;178609850 | chr2:179474579;179474578;179474577 |
Novex-1 | 8251 | 24976;24977;24978 | chr2:178609852;178609851;178609850 | chr2:179474579;179474578;179474577 |
Novex-2 | 8318 | 25177;25178;25179 | chr2:178609852;178609851;178609850 | chr2:179474579;179474578;179474577 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.012 | N | 0.197 | 0.137 | 0.211220785272 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 1.26695E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2106 | likely_benign | 0.2003 | benign | -0.482 | Destabilizing | 0.454 | N | 0.277 | neutral | N | 0.460950651 | None | None | N |
E/C | 0.8803 | likely_pathogenic | 0.865 | pathogenic | -0.193 | Destabilizing | 0.998 | D | 0.448 | neutral | None | None | None | None | N |
E/D | 0.1448 | likely_benign | 0.1437 | benign | -0.481 | Destabilizing | 0.012 | N | 0.163 | neutral | N | 0.40742281 | None | None | N |
E/F | 0.8645 | likely_pathogenic | 0.8439 | pathogenic | -0.199 | Destabilizing | 0.991 | D | 0.409 | neutral | None | None | None | None | N |
E/G | 0.1838 | likely_benign | 0.1574 | benign | -0.713 | Destabilizing | 0.005 | N | 0.194 | neutral | N | 0.400670196 | None | None | N |
E/H | 0.6214 | likely_pathogenic | 0.5968 | pathogenic | -0.006 | Destabilizing | 0.991 | D | 0.264 | neutral | None | None | None | None | N |
E/I | 0.6155 | likely_pathogenic | 0.5734 | pathogenic | 0.103 | Stabilizing | 0.974 | D | 0.411 | neutral | None | None | None | None | N |
E/K | 0.2315 | likely_benign | 0.2046 | benign | 0.181 | Stabilizing | 0.012 | N | 0.197 | neutral | N | 0.465721752 | None | None | N |
E/L | 0.5458 | ambiguous | 0.5192 | ambiguous | 0.103 | Stabilizing | 0.949 | D | 0.397 | neutral | None | None | None | None | N |
E/M | 0.5588 | ambiguous | 0.5367 | ambiguous | 0.177 | Stabilizing | 0.998 | D | 0.381 | neutral | None | None | None | None | N |
E/N | 0.3068 | likely_benign | 0.2891 | benign | -0.254 | Destabilizing | 0.842 | D | 0.201 | neutral | None | None | None | None | N |
E/P | 0.8842 | likely_pathogenic | 0.8731 | pathogenic | -0.072 | Destabilizing | 0.974 | D | 0.321 | neutral | None | None | None | None | N |
E/Q | 0.1823 | likely_benign | 0.1673 | benign | -0.198 | Destabilizing | 0.801 | D | 0.314 | neutral | N | 0.490060049 | None | None | N |
E/R | 0.4019 | ambiguous | 0.3646 | ambiguous | 0.445 | Stabilizing | 0.728 | D | 0.264 | neutral | None | None | None | None | N |
E/S | 0.2182 | likely_benign | 0.2026 | benign | -0.409 | Destabilizing | 0.688 | D | 0.227 | neutral | None | None | None | None | N |
E/T | 0.2675 | likely_benign | 0.2453 | benign | -0.219 | Destabilizing | 0.842 | D | 0.329 | neutral | None | None | None | None | N |
E/V | 0.3676 | ambiguous | 0.3349 | benign | -0.072 | Destabilizing | 0.966 | D | 0.367 | neutral | N | 0.45993193 | None | None | N |
E/W | 0.947 | likely_pathogenic | 0.9395 | pathogenic | 0.009 | Stabilizing | 0.998 | D | 0.495 | neutral | None | None | None | None | N |
E/Y | 0.7878 | likely_pathogenic | 0.7576 | pathogenic | 0.054 | Stabilizing | 0.991 | D | 0.375 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.