Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17206 | 51841;51842;51843 | chr2:178609807;178609806;178609805 | chr2:179474534;179474533;179474532 |
N2AB | 15565 | 46918;46919;46920 | chr2:178609807;178609806;178609805 | chr2:179474534;179474533;179474532 |
N2A | 14638 | 44137;44138;44139 | chr2:178609807;178609806;178609805 | chr2:179474534;179474533;179474532 |
N2B | 8141 | 24646;24647;24648 | chr2:178609807;178609806;178609805 | chr2:179474534;179474533;179474532 |
Novex-1 | 8266 | 25021;25022;25023 | chr2:178609807;178609806;178609805 | chr2:179474534;179474533;179474532 |
Novex-2 | 8333 | 25222;25223;25224 | chr2:178609807;178609806;178609805 | chr2:179474534;179474533;179474532 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs1305177155 | -0.342 | 0.684 | N | 0.423 | 0.271 | 0.222439326576 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 1.44827E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/N | rs1305177155 | -0.342 | 0.684 | N | 0.423 | 0.271 | 0.222439326576 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/N | rs1305177155 | -0.342 | 0.684 | N | 0.423 | 0.271 | 0.222439326576 | gnomAD-4.0.0 | 7.44109E-06 | None | None | None | None | N | None | 0 | 1.0014E-04 | None | 0 | 0 | None | 0 | 0 | 4.24013E-06 | 0 | 1.60241E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.163 | likely_benign | 0.1639 | benign | -0.591 | Destabilizing | 0.309 | N | 0.371 | neutral | N | 0.491623061 | None | None | N |
T/C | 0.5152 | ambiguous | 0.5264 | ambiguous | -0.256 | Destabilizing | 0.02 | N | 0.328 | neutral | None | None | None | None | N |
T/D | 0.6528 | likely_pathogenic | 0.6581 | pathogenic | -0.369 | Destabilizing | 0.742 | D | 0.464 | neutral | None | None | None | None | N |
T/E | 0.5 | ambiguous | 0.4897 | ambiguous | -0.204 | Destabilizing | 0.742 | D | 0.464 | neutral | None | None | None | None | N |
T/F | 0.4841 | ambiguous | 0.4947 | ambiguous | -0.546 | Destabilizing | 0.91 | D | 0.583 | neutral | None | None | None | None | N |
T/G | 0.4145 | ambiguous | 0.3958 | ambiguous | -0.961 | Destabilizing | 0.742 | D | 0.511 | neutral | None | None | None | None | N |
T/H | 0.3352 | likely_benign | 0.3312 | benign | -1.084 | Destabilizing | 0.996 | D | 0.572 | neutral | None | None | None | None | N |
T/I | 0.4387 | ambiguous | 0.4852 | ambiguous | 0.351 | Stabilizing | 0.007 | N | 0.321 | neutral | N | 0.515019996 | None | None | N |
T/K | 0.3906 | ambiguous | 0.3876 | ambiguous | 0.077 | Stabilizing | 0.742 | D | 0.461 | neutral | None | None | None | None | N |
T/L | 0.2553 | likely_benign | 0.2695 | benign | 0.351 | Stabilizing | 0.17 | N | 0.413 | neutral | None | None | None | None | N |
T/M | 0.1781 | likely_benign | 0.1801 | benign | 0.15 | Stabilizing | 0.91 | D | 0.529 | neutral | None | None | None | None | N |
T/N | 0.1902 | likely_benign | 0.203 | benign | -0.512 | Destabilizing | 0.684 | D | 0.423 | neutral | N | 0.457857204 | None | None | N |
T/P | 0.856 | likely_pathogenic | 0.8479 | pathogenic | 0.069 | Stabilizing | 0.939 | D | 0.543 | neutral | N | 0.521849968 | None | None | N |
T/Q | 0.3104 | likely_benign | 0.2974 | benign | -0.309 | Destabilizing | 0.953 | D | 0.533 | neutral | None | None | None | None | N |
T/R | 0.3399 | likely_benign | 0.3374 | benign | -0.129 | Destabilizing | 0.953 | D | 0.542 | neutral | None | None | None | None | N |
T/S | 0.1256 | likely_benign | 0.1307 | benign | -0.779 | Destabilizing | 0.034 | N | 0.187 | neutral | N | 0.397824679 | None | None | N |
T/V | 0.3066 | likely_benign | 0.3389 | benign | 0.069 | Stabilizing | 0.17 | N | 0.415 | neutral | None | None | None | None | N |
T/W | 0.7993 | likely_pathogenic | 0.7935 | pathogenic | -0.713 | Destabilizing | 0.996 | D | 0.601 | neutral | None | None | None | None | N |
T/Y | 0.445 | ambiguous | 0.4336 | ambiguous | -0.258 | Destabilizing | 0.953 | D | 0.586 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.