Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17217 | 51874;51875;51876 | chr2:178609774;178609773;178609772 | chr2:179474501;179474500;179474499 |
N2AB | 15576 | 46951;46952;46953 | chr2:178609774;178609773;178609772 | chr2:179474501;179474500;179474499 |
N2A | 14649 | 44170;44171;44172 | chr2:178609774;178609773;178609772 | chr2:179474501;179474500;179474499 |
N2B | 8152 | 24679;24680;24681 | chr2:178609774;178609773;178609772 | chr2:179474501;179474500;179474499 |
Novex-1 | 8277 | 25054;25055;25056 | chr2:178609774;178609773;178609772 | chr2:179474501;179474500;179474499 |
Novex-2 | 8344 | 25255;25256;25257 | chr2:178609774;178609773;178609772 | chr2:179474501;179474500;179474499 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.704 | N | 0.376 | 0.21 | 0.379020345274 | gnomAD-4.0.0 | 6.84539E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65777E-05 |
E/D | None | None | 0.704 | N | 0.357 | 0.11 | 0.229924730088 | gnomAD-4.0.0 | 1.36909E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79971E-06 | 0 | 0 |
E/G | None | None | 0.826 | N | 0.43 | 0.274 | 0.428630128466 | gnomAD-4.0.0 | 6.84539E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99849E-07 | 0 | 0 |
E/K | rs1060500503 | -0.732 | 0.704 | N | 0.39 | 0.223 | 0.311079019809 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 1.294E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1060500503 | -0.732 | 0.704 | N | 0.39 | 0.223 | 0.311079019809 | gnomAD-4.0.0 | 3.42267E-06 | None | None | None | None | N | None | 2.9933E-05 | 0 | None | 0 | 0 | None | 0 | 1.73792E-04 | 8.99849E-07 | 1.16009E-05 | 1.65772E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2953 | likely_benign | 0.2951 | benign | -0.976 | Destabilizing | 0.704 | D | 0.376 | neutral | N | 0.508496668 | None | None | N |
E/C | 0.9265 | likely_pathogenic | 0.9202 | pathogenic | -0.473 | Destabilizing | 0.999 | D | 0.573 | neutral | None | None | None | None | N |
E/D | 0.3415 | ambiguous | 0.3184 | benign | -1.014 | Destabilizing | 0.704 | D | 0.357 | neutral | N | 0.507341875 | None | None | N |
E/F | 0.8706 | likely_pathogenic | 0.8506 | pathogenic | -0.291 | Destabilizing | 0.997 | D | 0.554 | neutral | None | None | None | None | N |
E/G | 0.5146 | ambiguous | 0.498 | ambiguous | -1.361 | Destabilizing | 0.826 | D | 0.43 | neutral | N | 0.476296763 | None | None | N |
E/H | 0.8107 | likely_pathogenic | 0.792 | pathogenic | -0.535 | Destabilizing | 0.991 | D | 0.465 | neutral | None | None | None | None | N |
E/I | 0.4672 | ambiguous | 0.4559 | ambiguous | 0.085 | Stabilizing | 0.991 | D | 0.56 | neutral | None | None | None | None | N |
E/K | 0.6046 | likely_pathogenic | 0.5775 | pathogenic | -0.568 | Destabilizing | 0.704 | D | 0.39 | neutral | N | 0.459972003 | None | None | N |
E/L | 0.5988 | likely_pathogenic | 0.5803 | pathogenic | 0.085 | Stabilizing | 0.939 | D | 0.533 | neutral | None | None | None | None | N |
E/M | 0.5655 | likely_pathogenic | 0.5548 | ambiguous | 0.549 | Stabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
E/N | 0.5788 | likely_pathogenic | 0.5656 | pathogenic | -1.101 | Destabilizing | 0.17 | N | 0.291 | neutral | None | None | None | None | N |
E/P | 0.8217 | likely_pathogenic | 0.8454 | pathogenic | -0.248 | Destabilizing | 0.046 | N | 0.33 | neutral | None | None | None | None | N |
E/Q | 0.3016 | likely_benign | 0.2991 | benign | -0.95 | Destabilizing | 0.31 | N | 0.187 | neutral | N | 0.45743313 | None | None | N |
E/R | 0.728 | likely_pathogenic | 0.7062 | pathogenic | -0.285 | Destabilizing | 0.939 | D | 0.428 | neutral | None | None | None | None | N |
E/S | 0.4154 | ambiguous | 0.4082 | ambiguous | -1.451 | Destabilizing | 0.373 | N | 0.149 | neutral | None | None | None | None | N |
E/T | 0.361 | ambiguous | 0.3522 | ambiguous | -1.121 | Destabilizing | 0.884 | D | 0.382 | neutral | None | None | None | None | N |
E/V | 0.2926 | likely_benign | 0.2814 | benign | -0.248 | Destabilizing | 0.959 | D | 0.521 | neutral | N | 0.507573949 | None | None | N |
E/W | 0.9441 | likely_pathogenic | 0.9282 | pathogenic | 0.026 | Stabilizing | 0.999 | D | 0.616 | neutral | None | None | None | None | N |
E/Y | 0.795 | likely_pathogenic | 0.7502 | pathogenic | -0.008 | Destabilizing | 0.997 | D | 0.56 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.