Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17240 | 51943;51944;51945 | chr2:178609705;178609704;178609703 | chr2:179474432;179474431;179474430 |
N2AB | 15599 | 47020;47021;47022 | chr2:178609705;178609704;178609703 | chr2:179474432;179474431;179474430 |
N2A | 14672 | 44239;44240;44241 | chr2:178609705;178609704;178609703 | chr2:179474432;179474431;179474430 |
N2B | 8175 | 24748;24749;24750 | chr2:178609705;178609704;178609703 | chr2:179474432;179474431;179474430 |
Novex-1 | 8300 | 25123;25124;25125 | chr2:178609705;178609704;178609703 | chr2:179474432;179474431;179474430 |
Novex-2 | 8367 | 25324;25325;25326 | chr2:178609705;178609704;178609703 | chr2:179474432;179474431;179474430 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1295961462 | 0.356 | None | N | 0.346 | 0.096 | 0.204665344411 | gnomAD-2.1.1 | 4.14E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.48E-05 | None | 0 | 0 | 0 |
T/I | rs1295961462 | 0.356 | None | N | 0.346 | 0.096 | 0.204665344411 | gnomAD-4.0.0 | 4.14133E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.92403E-05 | 1.67235E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.079 | likely_benign | 0.0743 | benign | -0.808 | Destabilizing | None | N | 0.132 | neutral | N | 0.485155662 | None | None | N |
T/C | 0.2419 | likely_benign | 0.2378 | benign | -0.53 | Destabilizing | 0.204 | N | 0.484 | neutral | None | None | None | None | N |
T/D | 0.7566 | likely_pathogenic | 0.718 | pathogenic | -0.601 | Destabilizing | 0.068 | N | 0.543 | neutral | None | None | None | None | N |
T/E | 0.4548 | ambiguous | 0.4305 | ambiguous | -0.476 | Destabilizing | 0.068 | N | 0.509 | neutral | None | None | None | None | N |
T/F | 0.2367 | likely_benign | 0.2109 | benign | -0.578 | Destabilizing | 0.035 | N | 0.598 | neutral | None | None | None | None | N |
T/G | 0.34 | likely_benign | 0.3022 | benign | -1.176 | Destabilizing | 0.015 | N | 0.508 | neutral | None | None | None | None | N |
T/H | 0.3164 | likely_benign | 0.2919 | benign | -1.317 | Destabilizing | 0.747 | D | 0.553 | neutral | None | None | None | None | N |
T/I | 0.0932 | likely_benign | 0.0943 | benign | 0.122 | Stabilizing | None | N | 0.346 | neutral | N | 0.42547264 | None | None | N |
T/K | 0.2682 | likely_benign | 0.2642 | benign | -0.642 | Destabilizing | 0.068 | N | 0.504 | neutral | None | None | None | None | N |
T/L | 0.0892 | likely_benign | 0.0883 | benign | 0.122 | Stabilizing | 0.003 | N | 0.381 | neutral | None | None | None | None | N |
T/M | 0.0811 | likely_benign | 0.0851 | benign | 0.098 | Stabilizing | 0.112 | N | 0.505 | neutral | None | None | None | None | N |
T/N | 0.28 | likely_benign | 0.256 | benign | -0.995 | Destabilizing | 0.144 | N | 0.499 | neutral | N | 0.485849095 | None | None | N |
T/P | 0.719 | likely_pathogenic | 0.6514 | pathogenic | -0.154 | Destabilizing | 0.144 | N | 0.549 | neutral | N | 0.486022454 | None | None | N |
T/Q | 0.2339 | likely_benign | 0.2343 | benign | -0.857 | Destabilizing | 0.439 | N | 0.549 | neutral | None | None | None | None | N |
T/R | 0.2253 | likely_benign | 0.2153 | benign | -0.684 | Destabilizing | 0.204 | N | 0.547 | neutral | None | None | None | None | N |
T/S | 0.1611 | likely_benign | 0.1458 | benign | -1.248 | Destabilizing | 0.006 | N | 0.348 | neutral | N | 0.485155662 | None | None | N |
T/V | 0.0711 | likely_benign | 0.0744 | benign | -0.154 | Destabilizing | None | N | 0.133 | neutral | None | None | None | None | N |
T/W | 0.6045 | likely_pathogenic | 0.5726 | pathogenic | -0.692 | Destabilizing | 0.747 | D | 0.617 | neutral | None | None | None | None | N |
T/Y | 0.2957 | likely_benign | 0.2688 | benign | -0.362 | Destabilizing | 0.204 | N | 0.597 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.