Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17253 | 51982;51983;51984 | chr2:178609553;178609552;178609551 | chr2:179474280;179474279;179474278 |
N2AB | 15612 | 47059;47060;47061 | chr2:178609553;178609552;178609551 | chr2:179474280;179474279;179474278 |
N2A | 14685 | 44278;44279;44280 | chr2:178609553;178609552;178609551 | chr2:179474280;179474279;179474278 |
N2B | 8188 | 24787;24788;24789 | chr2:178609553;178609552;178609551 | chr2:179474280;179474279;179474278 |
Novex-1 | 8313 | 25162;25163;25164 | chr2:178609553;178609552;178609551 | chr2:179474280;179474279;179474278 |
Novex-2 | 8380 | 25363;25364;25365 | chr2:178609553;178609552;178609551 | chr2:179474280;179474279;179474278 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.968 | N | 0.785 | 0.533 | 0.869023813792 | gnomAD-4.0.0 | 3.20605E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.76027E-06 | 0 | 0 |
L/Q | rs747840389 | -0.36 | 0.83 | N | 0.775 | 0.442 | 0.805105696268 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | I | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/Q | rs747840389 | -0.36 | 0.83 | N | 0.775 | 0.442 | 0.805105696268 | gnomAD-4.0.0 | 1.60303E-06 | None | None | None | None | I | None | 0 | 2.2997E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.794 | likely_pathogenic | 0.838 | pathogenic | -2.32 | Highly Destabilizing | 0.48 | N | 0.715 | prob.delet. | None | None | None | None | I |
L/C | 0.8135 | likely_pathogenic | 0.8444 | pathogenic | -1.553 | Destabilizing | 0.993 | D | 0.737 | prob.delet. | None | None | None | None | I |
L/D | 0.9939 | likely_pathogenic | 0.9952 | pathogenic | -2.124 | Highly Destabilizing | 0.929 | D | 0.783 | deleterious | None | None | None | None | I |
L/E | 0.9701 | likely_pathogenic | 0.976 | pathogenic | -1.986 | Destabilizing | 0.929 | D | 0.785 | deleterious | None | None | None | None | I |
L/F | 0.5054 | ambiguous | 0.5428 | ambiguous | -1.421 | Destabilizing | 0.866 | D | 0.749 | deleterious | None | None | None | None | I |
L/G | 0.9292 | likely_pathogenic | 0.9455 | pathogenic | -2.799 | Highly Destabilizing | 0.866 | D | 0.792 | deleterious | None | None | None | None | I |
L/H | 0.9277 | likely_pathogenic | 0.943 | pathogenic | -2.138 | Highly Destabilizing | 0.993 | D | 0.768 | deleterious | None | None | None | None | I |
L/I | 0.2469 | likely_benign | 0.2694 | benign | -0.988 | Destabilizing | 0.48 | N | 0.593 | neutral | None | None | None | None | I |
L/K | 0.9324 | likely_pathogenic | 0.947 | pathogenic | -1.734 | Destabilizing | 0.866 | D | 0.783 | deleterious | None | None | None | None | I |
L/M | 0.1754 | likely_benign | 0.2013 | benign | -0.837 | Destabilizing | 0.041 | N | 0.224 | neutral | N | 0.507046379 | None | None | I |
L/N | 0.9597 | likely_pathogenic | 0.9699 | pathogenic | -1.786 | Destabilizing | 0.929 | D | 0.788 | deleterious | None | None | None | None | I |
L/P | 0.9124 | likely_pathogenic | 0.9273 | pathogenic | -1.407 | Destabilizing | 0.968 | D | 0.785 | deleterious | N | 0.507154854 | None | None | I |
L/Q | 0.8545 | likely_pathogenic | 0.8842 | pathogenic | -1.782 | Destabilizing | 0.83 | D | 0.775 | deleterious | N | 0.506647875 | None | None | I |
L/R | 0.9098 | likely_pathogenic | 0.9283 | pathogenic | -1.317 | Destabilizing | 0.83 | D | 0.769 | deleterious | N | 0.506647875 | None | None | I |
L/S | 0.9135 | likely_pathogenic | 0.9388 | pathogenic | -2.503 | Highly Destabilizing | 0.866 | D | 0.778 | deleterious | None | None | None | None | I |
L/T | 0.7619 | likely_pathogenic | 0.8238 | pathogenic | -2.229 | Highly Destabilizing | 0.866 | D | 0.769 | deleterious | None | None | None | None | I |
L/V | 0.2763 | likely_benign | 0.312 | benign | -1.407 | Destabilizing | 0.41 | N | 0.613 | neutral | N | 0.492756674 | None | None | I |
L/W | 0.8823 | likely_pathogenic | 0.9043 | pathogenic | -1.684 | Destabilizing | 0.993 | D | 0.763 | deleterious | None | None | None | None | I |
L/Y | 0.9203 | likely_pathogenic | 0.9303 | pathogenic | -1.428 | Destabilizing | 0.929 | D | 0.785 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.