Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17278 | 52057;52058;52059 | chr2:178609478;178609477;178609476 | chr2:179474205;179474204;179474203 |
N2AB | 15637 | 47134;47135;47136 | chr2:178609478;178609477;178609476 | chr2:179474205;179474204;179474203 |
N2A | 14710 | 44353;44354;44355 | chr2:178609478;178609477;178609476 | chr2:179474205;179474204;179474203 |
N2B | 8213 | 24862;24863;24864 | chr2:178609478;178609477;178609476 | chr2:179474205;179474204;179474203 |
Novex-1 | 8338 | 25237;25238;25239 | chr2:178609478;178609477;178609476 | chr2:179474205;179474204;179474203 |
Novex-2 | 8405 | 25438;25439;25440 | chr2:178609478;178609477;178609476 | chr2:179474205;179474204;179474203 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.966 | D | 0.613 | 0.289 | 0.475272412942 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93751E-06 | 0 | 0 |
T/S | None | None | 0.051 | D | 0.171 | 0.106 | 0.243972157842 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0758 | likely_benign | 0.0632 | benign | -0.533 | Destabilizing | 0.454 | N | 0.351 | neutral | D | 0.532192752 | None | None | I |
T/C | 0.3327 | likely_benign | 0.3107 | benign | -0.445 | Destabilizing | 0.998 | D | 0.544 | neutral | None | None | None | None | I |
T/D | 0.3328 | likely_benign | 0.3005 | benign | 0.105 | Stabilizing | 0.728 | D | 0.469 | neutral | None | None | None | None | I |
T/E | 0.211 | likely_benign | 0.1882 | benign | 0.091 | Stabilizing | 0.016 | N | 0.236 | neutral | None | None | None | None | I |
T/F | 0.2363 | likely_benign | 0.234 | benign | -0.725 | Destabilizing | 0.991 | D | 0.612 | neutral | None | None | None | None | I |
T/G | 0.2238 | likely_benign | 0.1968 | benign | -0.756 | Destabilizing | 0.728 | D | 0.521 | neutral | None | None | None | None | I |
T/H | 0.1874 | likely_benign | 0.1742 | benign | -0.976 | Destabilizing | 0.974 | D | 0.593 | neutral | None | None | None | None | I |
T/I | 0.1372 | likely_benign | 0.1276 | benign | -0.044 | Destabilizing | 0.966 | D | 0.613 | neutral | D | 0.536926569 | None | None | I |
T/K | 0.1184 | likely_benign | 0.1036 | benign | -0.581 | Destabilizing | 0.728 | D | 0.463 | neutral | None | None | None | None | I |
T/L | 0.0959 | likely_benign | 0.0922 | benign | -0.044 | Destabilizing | 0.842 | D | 0.475 | neutral | None | None | None | None | I |
T/M | 0.1045 | likely_benign | 0.0956 | benign | -0.025 | Destabilizing | 0.991 | D | 0.557 | neutral | None | None | None | None | I |
T/N | 0.1132 | likely_benign | 0.1075 | benign | -0.502 | Destabilizing | 0.801 | D | 0.414 | neutral | D | 0.536406494 | None | None | I |
T/P | 0.4771 | ambiguous | 0.4047 | ambiguous | -0.175 | Destabilizing | 0.966 | D | 0.577 | neutral | N | 0.513573635 | None | None | I |
T/Q | 0.1635 | likely_benign | 0.1366 | benign | -0.61 | Destabilizing | 0.172 | N | 0.248 | neutral | None | None | None | None | I |
T/R | 0.1119 | likely_benign | 0.1 | benign | -0.36 | Destabilizing | 0.842 | D | 0.513 | neutral | None | None | None | None | I |
T/S | 0.098 | likely_benign | 0.09 | benign | -0.747 | Destabilizing | 0.051 | N | 0.171 | neutral | D | 0.529765736 | None | None | I |
T/V | 0.1052 | likely_benign | 0.0968 | benign | -0.175 | Destabilizing | 0.842 | D | 0.431 | neutral | None | None | None | None | I |
T/W | 0.6148 | likely_pathogenic | 0.5876 | pathogenic | -0.729 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | I |
T/Y | 0.2719 | likely_benign | 0.251 | benign | -0.463 | Destabilizing | 0.991 | D | 0.614 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.