Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17279 | 52060;52061;52062 | chr2:178609475;178609474;178609473 | chr2:179474202;179474201;179474200 |
N2AB | 15638 | 47137;47138;47139 | chr2:178609475;178609474;178609473 | chr2:179474202;179474201;179474200 |
N2A | 14711 | 44356;44357;44358 | chr2:178609475;178609474;178609473 | chr2:179474202;179474201;179474200 |
N2B | 8214 | 24865;24866;24867 | chr2:178609475;178609474;178609473 | chr2:179474202;179474201;179474200 |
Novex-1 | 8339 | 25240;25241;25242 | chr2:178609475;178609474;178609473 | chr2:179474202;179474201;179474200 |
Novex-2 | 8406 | 25441;25442;25443 | chr2:178609475;178609474;178609473 | chr2:179474202;179474201;179474200 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.722 | D | 0.712 | 0.667 | 0.839211880287 | gnomAD-4.0.0 | 3.18798E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72551E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7337 | likely_pathogenic | 0.7566 | pathogenic | -2.086 | Highly Destabilizing | 0.775 | D | 0.67 | neutral | None | None | None | None | N |
I/C | 0.8705 | likely_pathogenic | 0.8713 | pathogenic | -1.292 | Destabilizing | 0.996 | D | 0.704 | prob.neutral | None | None | None | None | N |
I/D | 0.9912 | likely_pathogenic | 0.9919 | pathogenic | -1.652 | Destabilizing | 0.987 | D | 0.872 | deleterious | None | None | None | None | N |
I/E | 0.9647 | likely_pathogenic | 0.965 | pathogenic | -1.552 | Destabilizing | 0.961 | D | 0.866 | deleterious | None | None | None | None | N |
I/F | 0.5591 | ambiguous | 0.549 | ambiguous | -1.274 | Destabilizing | 0.82 | D | 0.672 | neutral | N | 0.503794855 | None | None | N |
I/G | 0.968 | likely_pathogenic | 0.9692 | pathogenic | -2.517 | Highly Destabilizing | 0.961 | D | 0.856 | deleterious | None | None | None | None | N |
I/H | 0.9604 | likely_pathogenic | 0.9602 | pathogenic | -1.673 | Destabilizing | 0.996 | D | 0.847 | deleterious | None | None | None | None | N |
I/K | 0.9072 | likely_pathogenic | 0.8986 | pathogenic | -1.577 | Destabilizing | 0.961 | D | 0.866 | deleterious | None | None | None | None | N |
I/L | 0.3034 | likely_benign | 0.2944 | benign | -0.916 | Destabilizing | 0.003 | N | 0.233 | neutral | N | 0.502273918 | None | None | N |
I/M | 0.2645 | likely_benign | 0.2666 | benign | -0.725 | Destabilizing | 0.901 | D | 0.645 | neutral | D | 0.531306859 | None | None | N |
I/N | 0.9051 | likely_pathogenic | 0.9176 | pathogenic | -1.547 | Destabilizing | 0.983 | D | 0.869 | deleterious | D | 0.531813838 | None | None | N |
I/P | 0.9635 | likely_pathogenic | 0.9598 | pathogenic | -1.279 | Destabilizing | 0.987 | D | 0.874 | deleterious | None | None | None | None | N |
I/Q | 0.9325 | likely_pathogenic | 0.9309 | pathogenic | -1.591 | Destabilizing | 0.987 | D | 0.885 | deleterious | None | None | None | None | N |
I/R | 0.8828 | likely_pathogenic | 0.8724 | pathogenic | -1.063 | Destabilizing | 0.961 | D | 0.869 | deleterious | None | None | None | None | N |
I/S | 0.8532 | likely_pathogenic | 0.878 | pathogenic | -2.235 | Highly Destabilizing | 0.949 | D | 0.793 | deleterious | N | 0.513456093 | None | None | N |
I/T | 0.7165 | likely_pathogenic | 0.7416 | pathogenic | -1.999 | Destabilizing | 0.722 | D | 0.712 | prob.delet. | D | 0.531306859 | None | None | N |
I/V | 0.0834 | likely_benign | 0.0808 | benign | -1.279 | Destabilizing | 0.034 | N | 0.149 | neutral | N | 0.451222021 | None | None | N |
I/W | 0.9794 | likely_pathogenic | 0.9766 | pathogenic | -1.44 | Destabilizing | 0.996 | D | 0.817 | deleterious | None | None | None | None | N |
I/Y | 0.9136 | likely_pathogenic | 0.9102 | pathogenic | -1.211 | Destabilizing | 0.961 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.