Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17285 | 52078;52079;52080 | chr2:178609457;178609456;178609455 | chr2:179474184;179474183;179474182 |
N2AB | 15644 | 47155;47156;47157 | chr2:178609457;178609456;178609455 | chr2:179474184;179474183;179474182 |
N2A | 14717 | 44374;44375;44376 | chr2:178609457;178609456;178609455 | chr2:179474184;179474183;179474182 |
N2B | 8220 | 24883;24884;24885 | chr2:178609457;178609456;178609455 | chr2:179474184;179474183;179474182 |
Novex-1 | 8345 | 25258;25259;25260 | chr2:178609457;178609456;178609455 | chr2:179474184;179474183;179474182 |
Novex-2 | 8412 | 25459;25460;25461 | chr2:178609457;178609456;178609455 | chr2:179474184;179474183;179474182 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | None | N | 0.211 | 0.198 | 0.203808441222 | gnomAD-4.0.0 | 1.36947E-06 | None | None | None | None | N | None | 2.99365E-05 | 0 | None | 0 | 0 | None | 0 | 1.73792E-04 | 0 | 0 | 0 |
E/G | None | None | 0.024 | N | 0.387 | 0.192 | 0.151104730317 | gnomAD-4.0.0 | 6.84734E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16009E-05 | 0 |
E/K | rs1355045941 | 0.309 | 0.024 | N | 0.452 | 0.177 | 0.184867976434 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1355045941 | 0.309 | 0.024 | N | 0.452 | 0.177 | 0.184867976434 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1355045941 | 0.309 | 0.024 | N | 0.452 | 0.177 | 0.184867976434 | gnomAD-4.0.0 | 2.56677E-06 | None | None | None | None | N | None | 0 | 1.69716E-05 | None | 0 | 0 | None | 0 | 0 | 2.39686E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1676 | likely_benign | 0.176 | benign | -0.206 | Destabilizing | None | N | 0.211 | neutral | N | 0.501442118 | None | None | N |
E/C | 0.7808 | likely_pathogenic | 0.7825 | pathogenic | -0.121 | Destabilizing | 0.864 | D | 0.591 | neutral | None | None | None | None | N |
E/D | 0.0712 | likely_benign | 0.0739 | benign | -0.247 | Destabilizing | None | N | 0.134 | neutral | N | 0.394042507 | None | None | N |
E/F | 0.7893 | likely_pathogenic | 0.8107 | pathogenic | -0.093 | Destabilizing | 0.628 | D | 0.607 | neutral | None | None | None | None | N |
E/G | 0.0865 | likely_benign | 0.0847 | benign | -0.386 | Destabilizing | 0.024 | N | 0.387 | neutral | N | 0.387300175 | None | None | N |
E/H | 0.3956 | ambiguous | 0.4076 | ambiguous | 0.323 | Stabilizing | 0.356 | N | 0.589 | neutral | None | None | None | None | N |
E/I | 0.4745 | ambiguous | 0.4922 | ambiguous | 0.227 | Stabilizing | 0.356 | N | 0.645 | neutral | None | None | None | None | N |
E/K | 0.1232 | likely_benign | 0.1223 | benign | 0.33 | Stabilizing | 0.024 | N | 0.452 | neutral | N | 0.470945853 | None | None | N |
E/L | 0.5218 | ambiguous | 0.5381 | ambiguous | 0.227 | Stabilizing | 0.072 | N | 0.546 | neutral | None | None | None | None | N |
E/M | 0.5133 | ambiguous | 0.5326 | ambiguous | 0.146 | Stabilizing | 0.628 | D | 0.591 | neutral | None | None | None | None | N |
E/N | 0.1177 | likely_benign | 0.1248 | benign | 0.043 | Stabilizing | None | N | 0.163 | neutral | None | None | None | None | N |
E/P | 0.6055 | likely_pathogenic | 0.5684 | pathogenic | 0.103 | Stabilizing | 0.136 | N | 0.625 | neutral | None | None | None | None | N |
E/Q | 0.1351 | likely_benign | 0.1379 | benign | 0.088 | Stabilizing | 0.055 | N | 0.447 | neutral | N | 0.490841122 | None | None | N |
E/R | 0.2278 | likely_benign | 0.2292 | benign | 0.602 | Stabilizing | 0.072 | N | 0.524 | neutral | None | None | None | None | N |
E/S | 0.1404 | likely_benign | 0.1489 | benign | -0.13 | Destabilizing | 0.016 | N | 0.339 | neutral | None | None | None | None | N |
E/T | 0.1991 | likely_benign | 0.2123 | benign | 0.02 | Stabilizing | 0.031 | N | 0.493 | neutral | None | None | None | None | N |
E/V | 0.3295 | likely_benign | 0.3398 | benign | 0.103 | Stabilizing | 0.055 | N | 0.527 | neutral | N | 0.455972057 | None | None | N |
E/W | 0.8859 | likely_pathogenic | 0.8826 | pathogenic | 0.024 | Stabilizing | 0.864 | D | 0.616 | neutral | None | None | None | None | N |
E/Y | 0.6081 | likely_pathogenic | 0.6146 | pathogenic | 0.144 | Stabilizing | 0.628 | D | 0.607 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.