Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17291 | 52096;52097;52098 | chr2:178609439;178609438;178609437 | chr2:179474166;179474165;179474164 |
N2AB | 15650 | 47173;47174;47175 | chr2:178609439;178609438;178609437 | chr2:179474166;179474165;179474164 |
N2A | 14723 | 44392;44393;44394 | chr2:178609439;178609438;178609437 | chr2:179474166;179474165;179474164 |
N2B | 8226 | 24901;24902;24903 | chr2:178609439;178609438;178609437 | chr2:179474166;179474165;179474164 |
Novex-1 | 8351 | 25276;25277;25278 | chr2:178609439;178609438;178609437 | chr2:179474166;179474165;179474164 |
Novex-2 | 8418 | 25477;25478;25479 | chr2:178609439;178609438;178609437 | chr2:179474166;179474165;179474164 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.984 | N | 0.721 | 0.214 | 0.391775403332 | gnomAD-4.0.0 | 1.59434E-06 | None | None | None | None | N | None | 5.67666E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1706 | likely_benign | 0.1643 | benign | -0.552 | Destabilizing | 0.103 | N | 0.536 | neutral | D | 0.530515097 | None | None | N |
E/C | 0.8527 | likely_pathogenic | 0.8407 | pathogenic | -0.219 | Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | N |
E/D | 0.1801 | likely_benign | 0.1748 | benign | -0.623 | Destabilizing | 0.896 | D | 0.693 | prob.neutral | D | 0.531381889 | None | None | N |
E/F | 0.7971 | likely_pathogenic | 0.7866 | pathogenic | -0.297 | Destabilizing | 0.988 | D | 0.871 | deleterious | None | None | None | None | N |
E/G | 0.1787 | likely_benign | 0.1654 | benign | -0.809 | Destabilizing | 0.896 | D | 0.749 | deleterious | D | 0.532248681 | None | None | N |
E/H | 0.5065 | ambiguous | 0.4836 | ambiguous | -0.281 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
E/I | 0.4193 | ambiguous | 0.413 | ambiguous | 0.111 | Stabilizing | 0.976 | D | 0.849 | deleterious | None | None | None | None | N |
E/K | 0.1439 | likely_benign | 0.1356 | benign | -0.088 | Destabilizing | 0.896 | D | 0.69 | prob.neutral | D | 0.531035172 | None | None | N |
E/L | 0.4106 | ambiguous | 0.3955 | ambiguous | 0.111 | Stabilizing | 0.851 | D | 0.771 | deleterious | None | None | None | None | N |
E/M | 0.5057 | ambiguous | 0.5039 | ambiguous | 0.296 | Stabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
E/N | 0.3321 | likely_benign | 0.3214 | benign | -0.417 | Destabilizing | 0.976 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/P | 0.5006 | ambiguous | 0.4618 | ambiguous | -0.089 | Destabilizing | 0.988 | D | 0.741 | deleterious | None | None | None | None | N |
E/Q | 0.1437 | likely_benign | 0.1429 | benign | -0.357 | Destabilizing | 0.984 | D | 0.721 | prob.delet. | N | 0.512700128 | None | None | N |
E/R | 0.2506 | likely_benign | 0.2353 | benign | 0.168 | Stabilizing | 0.976 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/S | 0.2322 | likely_benign | 0.2188 | benign | -0.619 | Destabilizing | 0.851 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/T | 0.224 | likely_benign | 0.217 | benign | -0.416 | Destabilizing | 0.132 | N | 0.536 | neutral | None | None | None | None | N |
E/V | 0.2374 | likely_benign | 0.2334 | benign | -0.089 | Destabilizing | 0.811 | D | 0.755 | deleterious | D | 0.532075322 | None | None | N |
E/W | 0.8951 | likely_pathogenic | 0.8894 | pathogenic | -0.113 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
E/Y | 0.691 | likely_pathogenic | 0.6743 | pathogenic | -0.061 | Destabilizing | 0.996 | D | 0.814 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.