Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17323 | 52192;52193;52194 | chr2:178609343;178609342;178609341 | chr2:179474070;179474069;179474068 |
N2AB | 15682 | 47269;47270;47271 | chr2:178609343;178609342;178609341 | chr2:179474070;179474069;179474068 |
N2A | 14755 | 44488;44489;44490 | chr2:178609343;178609342;178609341 | chr2:179474070;179474069;179474068 |
N2B | 8258 | 24997;24998;24999 | chr2:178609343;178609342;178609341 | chr2:179474070;179474069;179474068 |
Novex-1 | 8383 | 25372;25373;25374 | chr2:178609343;178609342;178609341 | chr2:179474070;179474069;179474068 |
Novex-2 | 8450 | 25573;25574;25575 | chr2:178609343;178609342;178609341 | chr2:179474070;179474069;179474068 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.002 | N | 0.273 | 0.114 | 0.227934060464 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0895 | likely_benign | 0.094 | benign | -0.605 | Destabilizing | 0.013 | N | 0.263 | neutral | None | None | None | None | N |
S/C | 0.1116 | likely_benign | 0.1105 | benign | -0.512 | Destabilizing | 0.993 | D | 0.701 | prob.neutral | N | 0.509067412 | None | None | N |
S/D | 0.4072 | ambiguous | 0.3727 | ambiguous | -0.176 | Destabilizing | 0.543 | D | 0.671 | neutral | None | None | None | None | N |
S/E | 0.4297 | ambiguous | 0.4308 | ambiguous | -0.136 | Destabilizing | 0.704 | D | 0.676 | prob.neutral | None | None | None | None | N |
S/F | 0.1533 | likely_benign | 0.1547 | benign | -0.622 | Destabilizing | 0.944 | D | 0.703 | prob.neutral | None | None | None | None | N |
S/G | 0.1354 | likely_benign | 0.1473 | benign | -0.9 | Destabilizing | 0.002 | N | 0.287 | neutral | N | 0.50791317 | None | None | N |
S/H | 0.2576 | likely_benign | 0.2344 | benign | -1.311 | Destabilizing | 0.944 | D | 0.713 | prob.delet. | None | None | None | None | N |
S/I | 0.1476 | likely_benign | 0.155 | benign | 0.079 | Stabilizing | 0.863 | D | 0.732 | prob.delet. | D | 0.533502261 | None | None | N |
S/K | 0.6115 | likely_pathogenic | 0.5993 | pathogenic | -0.631 | Destabilizing | 0.704 | D | 0.699 | prob.neutral | None | None | None | None | N |
S/L | 0.1028 | likely_benign | 0.1049 | benign | 0.079 | Stabilizing | 0.543 | D | 0.749 | deleterious | None | None | None | None | N |
S/M | 0.185 | likely_benign | 0.1857 | benign | 0.11 | Stabilizing | 0.981 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/N | 0.1631 | likely_benign | 0.161 | benign | -0.712 | Destabilizing | 0.002 | N | 0.273 | neutral | N | 0.493250362 | None | None | N |
S/P | 0.9068 | likely_pathogenic | 0.9165 | pathogenic | -0.113 | Destabilizing | 0.944 | D | 0.763 | deleterious | None | None | None | None | N |
S/Q | 0.3991 | ambiguous | 0.4154 | ambiguous | -0.736 | Destabilizing | 0.944 | D | 0.726 | prob.delet. | None | None | None | None | N |
S/R | 0.5038 | ambiguous | 0.5171 | ambiguous | -0.64 | Destabilizing | 0.642 | D | 0.771 | deleterious | N | 0.490652774 | None | None | N |
S/T | 0.0721 | likely_benign | 0.0764 | benign | -0.665 | Destabilizing | 0.01 | N | 0.26 | neutral | N | 0.486479106 | None | None | N |
S/V | 0.1593 | likely_benign | 0.164 | benign | -0.113 | Destabilizing | 0.543 | D | 0.757 | deleterious | None | None | None | None | N |
S/W | 0.3 | likely_benign | 0.2932 | benign | -0.662 | Destabilizing | 0.995 | D | 0.723 | prob.delet. | None | None | None | None | N |
S/Y | 0.1645 | likely_benign | 0.1572 | benign | -0.357 | Destabilizing | 0.981 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.