Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17333 | 52222;52223;52224 | chr2:178609313;178609312;178609311 | chr2:179474040;179474039;179474038 |
N2AB | 15692 | 47299;47300;47301 | chr2:178609313;178609312;178609311 | chr2:179474040;179474039;179474038 |
N2A | 14765 | 44518;44519;44520 | chr2:178609313;178609312;178609311 | chr2:179474040;179474039;179474038 |
N2B | 8268 | 25027;25028;25029 | chr2:178609313;178609312;178609311 | chr2:179474040;179474039;179474038 |
Novex-1 | 8393 | 25402;25403;25404 | chr2:178609313;178609312;178609311 | chr2:179474040;179474039;179474038 |
Novex-2 | 8460 | 25603;25604;25605 | chr2:178609313;178609312;178609311 | chr2:179474040;179474039;179474038 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.196 | N | 0.469 | 0.083 | 0.247872288689 | gnomAD-4.0.0 | 1.60681E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88317E-06 | 0 | 0 |
Q/P | None | None | 0.065 | N | 0.572 | 0.267 | 0.301122078929 | gnomAD-4.0.0 | 5.49847E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.31697E-06 | 1.1714E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.19 | likely_benign | 0.1733 | benign | 0.175 | Stabilizing | 0.002 | N | 0.354 | neutral | None | None | None | None | N |
Q/C | 0.3652 | ambiguous | 0.4077 | ambiguous | 0.179 | Stabilizing | 0.497 | N | 0.623 | neutral | None | None | None | None | N |
Q/D | 0.5104 | ambiguous | 0.4777 | ambiguous | -1.748 | Destabilizing | 0.009 | N | 0.416 | neutral | None | None | None | None | N |
Q/E | 0.1041 | likely_benign | 0.0916 | benign | -1.649 | Destabilizing | None | N | 0.161 | neutral | N | 0.486727035 | None | None | N |
Q/F | 0.4175 | ambiguous | 0.4109 | ambiguous | 0.09 | Stabilizing | None | N | 0.524 | neutral | None | None | None | None | N |
Q/G | 0.3094 | likely_benign | 0.2907 | benign | -0.159 | Destabilizing | 0.018 | N | 0.449 | neutral | None | None | None | None | N |
Q/H | 0.1433 | likely_benign | 0.1554 | benign | -0.519 | Destabilizing | 0.196 | N | 0.469 | neutral | N | 0.489504672 | None | None | N |
Q/I | 0.2064 | likely_benign | 0.2044 | benign | 1.003 | Stabilizing | None | N | 0.496 | neutral | None | None | None | None | N |
Q/K | 0.0868 | likely_benign | 0.0994 | benign | -0.096 | Destabilizing | 0.003 | N | 0.415 | neutral | N | 0.466525121 | None | None | N |
Q/L | 0.1198 | likely_benign | 0.1198 | benign | 1.003 | Stabilizing | 0.001 | N | 0.459 | neutral | N | 0.470797577 | None | None | N |
Q/M | 0.2632 | likely_benign | 0.26 | benign | 1.423 | Stabilizing | 0.138 | N | 0.507 | neutral | None | None | None | None | N |
Q/N | 0.3014 | likely_benign | 0.2904 | benign | -0.845 | Destabilizing | 0.018 | N | 0.519 | neutral | None | None | None | None | N |
Q/P | 0.7914 | likely_pathogenic | 0.7874 | pathogenic | 0.76 | Stabilizing | 0.065 | N | 0.572 | neutral | N | 0.489758161 | None | None | N |
Q/R | 0.0858 | likely_benign | 0.0982 | benign | -0.132 | Destabilizing | 0.007 | N | 0.565 | neutral | N | 0.493807723 | None | None | N |
Q/S | 0.1944 | likely_benign | 0.1742 | benign | -0.686 | Destabilizing | None | N | 0.159 | neutral | None | None | None | None | N |
Q/T | 0.1442 | likely_benign | 0.1438 | benign | -0.425 | Destabilizing | 0.004 | N | 0.369 | neutral | None | None | None | None | N |
Q/V | 0.1466 | likely_benign | 0.145 | benign | 0.76 | Stabilizing | None | N | 0.365 | neutral | None | None | None | None | N |
Q/W | 0.4182 | ambiguous | 0.4706 | ambiguous | -0.115 | Destabilizing | 0.788 | D | 0.623 | neutral | None | None | None | None | N |
Q/Y | 0.2883 | likely_benign | 0.2939 | benign | 0.359 | Stabilizing | 0.022 | N | 0.573 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.