Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17335 | 52228;52229;52230 | chr2:178609307;178609306;178609305 | chr2:179474034;179474033;179474032 |
N2AB | 15694 | 47305;47306;47307 | chr2:178609307;178609306;178609305 | chr2:179474034;179474033;179474032 |
N2A | 14767 | 44524;44525;44526 | chr2:178609307;178609306;178609305 | chr2:179474034;179474033;179474032 |
N2B | 8270 | 25033;25034;25035 | chr2:178609307;178609306;178609305 | chr2:179474034;179474033;179474032 |
Novex-1 | 8395 | 25408;25409;25410 | chr2:178609307;178609306;178609305 | chr2:179474034;179474033;179474032 |
Novex-2 | 8462 | 25609;25610;25611 | chr2:178609307;178609306;178609305 | chr2:179474034;179474033;179474032 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs763755830 | -1.859 | 0.002 | N | 0.571 | 0.178 | None | gnomAD-2.1.1 | 1.46E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.23E-05 | None | 0 | None | 4.07E-05 | 1.59E-05 | 0 |
R/C | rs763755830 | -1.859 | 0.002 | N | 0.571 | 0.178 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
R/C | rs763755830 | -1.859 | 0.002 | N | 0.571 | 0.178 | None | gnomAD-4.0.0 | 1.30764E-05 | None | None | None | None | N | None | 1.34351E-05 | 0 | None | 0 | 2.24558E-05 | None | 1.56902E-05 | 0 | 1.36057E-05 | 2.22489E-05 | 0 |
R/G | None | None | None | N | 0.398 | 0.236 | 0.490771696789 | gnomAD-4.0.0 | 6.87758E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.53846E-05 | None | 0 | 0 | 0 | 0 | 0 |
R/H | rs367603302 | -2.017 | 0.006 | N | 0.339 | 0.129 | None | gnomAD-2.1.1 | 1.31519E-04 | None | None | None | None | N | None | 4.98587E-04 | 1.15788E-04 | None | 1.11449E-03 | 0 | None | 3.42E-05 | None | 0 | 3.19E-05 | 5.74878E-04 |
R/H | rs367603302 | -2.017 | 0.006 | N | 0.339 | 0.129 | None | gnomAD-3.1.2 | 1.71143E-04 | None | None | None | None | N | None | 4.83045E-04 | 0 | 0 | 8.65052E-04 | 0 | None | 0 | 0 | 4.42E-05 | 0 | 0 |
R/H | rs367603302 | -2.017 | 0.006 | N | 0.339 | 0.129 | None | gnomAD-4.0.0 | 8.65936E-05 | None | None | None | None | N | None | 3.89607E-04 | 8.45881E-05 | None | 1.09837E-03 | 0 | None | 0 | 3.31126E-04 | 5.35884E-05 | 2.2303E-05 | 9.66526E-05 |
R/L | rs367603302 | None | None | N | 0.408 | 0.224 | 0.497613835824 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/L | rs367603302 | None | None | N | 0.408 | 0.224 | 0.497613835824 | gnomAD-4.0.0 | 6.58241E-06 | None | None | None | None | N | None | 2.41523E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3567 | ambiguous | 0.2895 | benign | -1.263 | Destabilizing | None | N | 0.286 | neutral | None | None | None | None | N |
R/C | 0.1302 | likely_benign | 0.1171 | benign | -1.473 | Destabilizing | 0.002 | N | 0.571 | neutral | N | 0.486381254 | None | None | N |
R/D | 0.7424 | likely_pathogenic | 0.6839 | pathogenic | -0.699 | Destabilizing | 0.148 | N | 0.579 | neutral | None | None | None | None | N |
R/E | 0.3993 | ambiguous | 0.3562 | ambiguous | -0.558 | Destabilizing | 0.148 | N | 0.473 | neutral | None | None | None | None | N |
R/F | 0.3236 | likely_benign | 0.2649 | benign | -1.058 | Destabilizing | 0.001 | N | 0.585 | neutral | None | None | None | None | N |
R/G | 0.3682 | ambiguous | 0.3172 | benign | -1.578 | Destabilizing | None | N | 0.398 | neutral | N | 0.485874275 | None | None | N |
R/H | 0.0822 | likely_benign | 0.0796 | benign | -1.585 | Destabilizing | 0.006 | N | 0.339 | neutral | N | 0.509145321 | None | None | N |
R/I | 0.1351 | likely_benign | 0.1109 | benign | -0.398 | Destabilizing | 0.08 | N | 0.469 | neutral | None | None | None | None | N |
R/K | 0.1016 | likely_benign | 0.0988 | benign | -1.412 | Destabilizing | 0.07 | N | 0.409 | neutral | None | None | None | None | N |
R/L | 0.1622 | likely_benign | 0.138 | benign | -0.398 | Destabilizing | None | N | 0.408 | neutral | N | 0.483766874 | None | None | N |
R/M | 0.1826 | likely_benign | 0.1472 | benign | -0.711 | Destabilizing | 0.596 | D | 0.615 | neutral | None | None | None | None | N |
R/N | 0.5428 | ambiguous | 0.4869 | ambiguous | -1.004 | Destabilizing | 0.08 | N | 0.564 | neutral | None | None | None | None | N |
R/P | 0.9583 | likely_pathogenic | 0.948 | pathogenic | -0.668 | Destabilizing | 0.62 | D | 0.621 | neutral | N | 0.497648654 | None | None | N |
R/Q | 0.1143 | likely_benign | 0.1114 | benign | -1.125 | Destabilizing | 0.296 | N | 0.573 | neutral | None | None | None | None | N |
R/S | 0.4121 | ambiguous | 0.3514 | ambiguous | -1.798 | Destabilizing | 0.002 | N | 0.293 | neutral | N | 0.480438568 | None | None | N |
R/T | 0.1712 | likely_benign | 0.1417 | benign | -1.474 | Destabilizing | 0.036 | N | 0.397 | neutral | None | None | None | None | N |
R/V | 0.1989 | likely_benign | 0.165 | benign | -0.668 | Destabilizing | 0.002 | N | 0.569 | neutral | None | None | None | None | N |
R/W | 0.1259 | likely_benign | 0.1066 | benign | -0.666 | Destabilizing | 0.901 | D | 0.639 | neutral | None | None | None | None | N |
R/Y | 0.2792 | likely_benign | 0.2455 | benign | -0.362 | Destabilizing | 0.174 | N | 0.62 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.