Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17339 | 52240;52241;52242 | chr2:178609295;178609294;178609293 | chr2:179474022;179474021;179474020 |
N2AB | 15698 | 47317;47318;47319 | chr2:178609295;178609294;178609293 | chr2:179474022;179474021;179474020 |
N2A | 14771 | 44536;44537;44538 | chr2:178609295;178609294;178609293 | chr2:179474022;179474021;179474020 |
N2B | 8274 | 25045;25046;25047 | chr2:178609295;178609294;178609293 | chr2:179474022;179474021;179474020 |
Novex-1 | 8399 | 25420;25421;25422 | chr2:178609295;178609294;178609293 | chr2:179474022;179474021;179474020 |
Novex-2 | 8466 | 25621;25622;25623 | chr2:178609295;178609294;178609293 | chr2:179474022;179474021;179474020 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs765426395 | None | 0.978 | N | 0.529 | 0.153 | 0.292062946507 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
S/Y | None | None | 0.999 | N | 0.773 | 0.469 | 0.806415548049 | gnomAD-4.0.0 | 1.62947E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.49504E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0804 | likely_benign | 0.0792 | benign | -0.547 | Destabilizing | 0.37 | N | 0.312 | neutral | N | 0.429406741 | None | None | N |
S/C | 0.0829 | likely_benign | 0.0863 | benign | -1.019 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.489017978 | None | None | N |
S/D | 0.9895 | likely_pathogenic | 0.9883 | pathogenic | -2.445 | Highly Destabilizing | 0.992 | D | 0.651 | neutral | None | None | None | None | N |
S/E | 0.992 | likely_pathogenic | 0.9913 | pathogenic | -2.301 | Highly Destabilizing | 0.992 | D | 0.635 | neutral | None | None | None | None | N |
S/F | 0.9611 | likely_pathogenic | 0.95 | pathogenic | -0.589 | Destabilizing | 0.999 | D | 0.767 | deleterious | N | 0.501581766 | None | None | N |
S/G | 0.3022 | likely_benign | 0.2762 | benign | -0.842 | Destabilizing | 0.967 | D | 0.539 | neutral | None | None | None | None | N |
S/H | 0.9797 | likely_pathogenic | 0.975 | pathogenic | -1.287 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
S/I | 0.5927 | likely_pathogenic | 0.5704 | pathogenic | 0.162 | Stabilizing | 0.998 | D | 0.764 | deleterious | None | None | None | None | N |
S/K | 0.9978 | likely_pathogenic | 0.9976 | pathogenic | -0.687 | Destabilizing | 0.983 | D | 0.634 | neutral | None | None | None | None | N |
S/L | 0.575 | likely_pathogenic | 0.5428 | ambiguous | 0.162 | Stabilizing | 0.983 | D | 0.682 | prob.neutral | None | None | None | None | N |
S/M | 0.7839 | likely_pathogenic | 0.7722 | pathogenic | 0.015 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
S/N | 0.8881 | likely_pathogenic | 0.8836 | pathogenic | -1.463 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
S/P | 0.8654 | likely_pathogenic | 0.8424 | pathogenic | -0.042 | Destabilizing | 0.997 | D | 0.743 | deleterious | D | 0.525016064 | None | None | N |
S/Q | 0.9865 | likely_pathogenic | 0.9853 | pathogenic | -1.353 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
S/R | 0.9937 | likely_pathogenic | 0.9928 | pathogenic | -0.825 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
S/T | 0.1428 | likely_benign | 0.1507 | benign | -0.973 | Destabilizing | 0.978 | D | 0.529 | neutral | N | 0.474395243 | None | None | N |
S/V | 0.3817 | ambiguous | 0.3873 | ambiguous | -0.042 | Destabilizing | 0.995 | D | 0.719 | prob.delet. | None | None | None | None | N |
S/W | 0.9894 | likely_pathogenic | 0.9859 | pathogenic | -0.987 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
S/Y | 0.9696 | likely_pathogenic | 0.9606 | pathogenic | -0.49 | Destabilizing | 0.999 | D | 0.773 | deleterious | N | 0.501835255 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.