Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17350 | 52273;52274;52275 | chr2:178609262;178609261;178609260 | chr2:179473989;179473988;179473987 |
N2AB | 15709 | 47350;47351;47352 | chr2:178609262;178609261;178609260 | chr2:179473989;179473988;179473987 |
N2A | 14782 | 44569;44570;44571 | chr2:178609262;178609261;178609260 | chr2:179473989;179473988;179473987 |
N2B | 8285 | 25078;25079;25080 | chr2:178609262;178609261;178609260 | chr2:179473989;179473988;179473987 |
Novex-1 | 8410 | 25453;25454;25455 | chr2:178609262;178609261;178609260 | chr2:179473989;179473988;179473987 |
Novex-2 | 8477 | 25654;25655;25656 | chr2:178609262;178609261;178609260 | chr2:179473989;179473988;179473987 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs545725664 | -1.141 | 0.026 | N | 0.433 | 0.111 | 0.369682402691 | gnomAD-2.1.1 | 5.25E-05 | None | None | None | None | N | None | 0 | 4.19E-05 | None | 0 | 0 | None | 0 | None | 0 | 9.79E-05 | 0 |
K/R | rs545725664 | -1.141 | 0.026 | N | 0.433 | 0.111 | 0.369682402691 | gnomAD-4.0.0 | 1.2239E-05 | None | None | None | None | N | None | 0 | 3.04971E-05 | None | 0 | 0 | None | 0 | 0 | 1.48099E-05 | 0 | 0 |
K/T | None | None | 0.984 | N | 0.711 | 0.386 | 0.392855499163 | gnomAD-4.0.0 | 7.19939E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.74984E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4454 | ambiguous | 0.4079 | ambiguous | -0.912 | Destabilizing | 0.919 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/C | 0.6605 | likely_pathogenic | 0.659 | pathogenic | -1.158 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
K/D | 0.8363 | likely_pathogenic | 0.7933 | pathogenic | -1.088 | Destabilizing | 0.988 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/E | 0.245 | likely_benign | 0.2191 | benign | -0.885 | Destabilizing | 0.811 | D | 0.745 | deleterious | N | 0.498773612 | None | None | N |
K/F | 0.8273 | likely_pathogenic | 0.8037 | pathogenic | -0.208 | Destabilizing | 0.996 | D | 0.811 | deleterious | None | None | None | None | N |
K/G | 0.7712 | likely_pathogenic | 0.7278 | pathogenic | -1.363 | Destabilizing | 0.959 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/H | 0.3115 | likely_benign | 0.2988 | benign | -1.643 | Destabilizing | 0.997 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/I | 0.2985 | likely_benign | 0.2758 | benign | 0.315 | Stabilizing | 0.984 | D | 0.801 | deleterious | N | 0.503046068 | None | None | N |
K/L | 0.3664 | ambiguous | 0.3373 | benign | 0.315 | Stabilizing | 0.919 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/M | 0.1898 | likely_benign | 0.1778 | benign | 0.014 | Stabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | N |
K/N | 0.6031 | likely_pathogenic | 0.5377 | ambiguous | -1.382 | Destabilizing | 0.968 | D | 0.677 | prob.neutral | N | 0.487088816 | None | None | N |
K/P | 0.9891 | likely_pathogenic | 0.9844 | pathogenic | -0.066 | Destabilizing | 0.996 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/Q | 0.1403 | likely_benign | 0.1356 | benign | -1.229 | Destabilizing | 0.437 | N | 0.449 | neutral | N | 0.510297328 | None | None | N |
K/R | 0.0934 | likely_benign | 0.0934 | benign | -1.215 | Destabilizing | 0.026 | N | 0.433 | neutral | N | 0.485036311 | None | None | N |
K/S | 0.4972 | ambiguous | 0.4487 | ambiguous | -1.931 | Destabilizing | 0.919 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/T | 0.1355 | likely_benign | 0.1222 | benign | -1.498 | Destabilizing | 0.984 | D | 0.711 | prob.delet. | N | 0.468893422 | None | None | N |
K/V | 0.2777 | likely_benign | 0.2594 | benign | -0.066 | Destabilizing | 0.988 | D | 0.74 | deleterious | None | None | None | None | N |
K/W | 0.8017 | likely_pathogenic | 0.7996 | pathogenic | -0.208 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
K/Y | 0.6796 | likely_pathogenic | 0.6561 | pathogenic | 0.112 | Stabilizing | 0.996 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.