Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1736 | 5431;5432;5433 | chr2:178776658;178776657;178776656 | chr2:179641385;179641384;179641383 |
N2AB | 1736 | 5431;5432;5433 | chr2:178776658;178776657;178776656 | chr2:179641385;179641384;179641383 |
N2A | 1736 | 5431;5432;5433 | chr2:178776658;178776657;178776656 | chr2:179641385;179641384;179641383 |
N2B | 1690 | 5293;5294;5295 | chr2:178776658;178776657;178776656 | chr2:179641385;179641384;179641383 |
Novex-1 | 1690 | 5293;5294;5295 | chr2:178776658;178776657;178776656 | chr2:179641385;179641384;179641383 |
Novex-2 | 1690 | 5293;5294;5295 | chr2:178776658;178776657;178776656 | chr2:179641385;179641384;179641383 |
Novex-3 | 1736 | 5431;5432;5433 | chr2:178776658;178776657;178776656 | chr2:179641385;179641384;179641383 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs2092259333 | None | 1.0 | D | 0.76 | 0.759 | 0.758467727117 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs2092259333 | None | 1.0 | D | 0.76 | 0.759 | 0.758467727117 | gnomAD-4.0.0 | 6.56875E-06 | None | None | None | None | I | None | 2.41208E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8857 | likely_pathogenic | 0.8723 | pathogenic | -1.545 | Destabilizing | 0.999 | D | 0.667 | neutral | D | 0.752369831 | None | None | I |
V/C | 0.9825 | likely_pathogenic | 0.9804 | pathogenic | -0.85 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
V/D | 0.9987 | likely_pathogenic | 0.9987 | pathogenic | -1.481 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
V/E | 0.994 | likely_pathogenic | 0.9936 | pathogenic | -1.471 | Destabilizing | 1.0 | D | 0.866 | deleterious | D | 0.807966053 | None | None | I |
V/F | 0.9421 | likely_pathogenic | 0.9398 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
V/G | 0.965 | likely_pathogenic | 0.9627 | pathogenic | -1.882 | Destabilizing | 1.0 | D | 0.866 | deleterious | D | 0.807966053 | None | None | I |
V/H | 0.9986 | likely_pathogenic | 0.9986 | pathogenic | -1.502 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
V/I | 0.1753 | likely_benign | 0.1615 | benign | -0.706 | Destabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | I |
V/K | 0.9956 | likely_pathogenic | 0.9955 | pathogenic | -1.338 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | I |
V/L | 0.8502 | likely_pathogenic | 0.8219 | pathogenic | -0.706 | Destabilizing | 0.997 | D | 0.691 | prob.neutral | D | 0.636141943 | None | None | I |
V/M | 0.8269 | likely_pathogenic | 0.8012 | pathogenic | -0.449 | Destabilizing | 1.0 | D | 0.76 | deleterious | D | 0.736711137 | None | None | I |
V/N | 0.9948 | likely_pathogenic | 0.9947 | pathogenic | -1.034 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | I |
V/P | 0.991 | likely_pathogenic | 0.9908 | pathogenic | -0.952 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
V/Q | 0.9932 | likely_pathogenic | 0.9927 | pathogenic | -1.186 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
V/R | 0.9918 | likely_pathogenic | 0.9916 | pathogenic | -0.832 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
V/S | 0.971 | likely_pathogenic | 0.9689 | pathogenic | -1.521 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
V/T | 0.8283 | likely_pathogenic | 0.8138 | pathogenic | -1.402 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | I |
V/W | 0.9988 | likely_pathogenic | 0.9987 | pathogenic | -1.4 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
V/Y | 0.9965 | likely_pathogenic | 0.9963 | pathogenic | -1.126 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.