Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17380 | 52363;52364;52365 | chr2:178608873;178608872;178608871 | chr2:179473600;179473599;179473598 |
N2AB | 15739 | 47440;47441;47442 | chr2:178608873;178608872;178608871 | chr2:179473600;179473599;179473598 |
N2A | 14812 | 44659;44660;44661 | chr2:178608873;178608872;178608871 | chr2:179473600;179473599;179473598 |
N2B | 8315 | 25168;25169;25170 | chr2:178608873;178608872;178608871 | chr2:179473600;179473599;179473598 |
Novex-1 | 8440 | 25543;25544;25545 | chr2:178608873;178608872;178608871 | chr2:179473600;179473599;179473598 |
Novex-2 | 8507 | 25744;25745;25746 | chr2:178608873;178608872;178608871 | chr2:179473600;179473599;179473598 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs373305248 | -0.575 | 0.822 | N | 0.548 | 0.415 | 0.213573922156 | gnomAD-2.1.1 | 8.09E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
D/G | rs373305248 | -0.575 | 0.822 | N | 0.548 | 0.415 | 0.213573922156 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94628E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs373305248 | -0.575 | 0.822 | N | 0.548 | 0.415 | 0.213573922156 | gnomAD-4.0.0 | 2.48228E-06 | None | None | None | None | N | None | 0 | 1.668E-05 | None | 0 | 4.47227E-05 | None | 0 | 0 | 0 | 1.0983E-05 | 0 |
D/N | rs886042593 | None | 0.822 | N | 0.541 | 0.295 | 0.187945064343 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 4.78927E-04 |
D/N | rs886042593 | None | 0.822 | N | 0.541 | 0.295 | 0.187945064343 | gnomAD-4.0.0 | 1.316E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47184E-05 | 0 | 4.78927E-04 |
D/V | rs373305248 | 0.412 | 0.942 | N | 0.642 | 0.504 | None | gnomAD-2.1.1 | 7.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.41101E-04 | 2.82008E-04 |
D/V | rs373305248 | 0.412 | 0.942 | N | 0.642 | 0.504 | None | gnomAD-3.1.2 | 7.24E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.61893E-04 | 0 | 0 |
D/V | rs373305248 | 0.412 | 0.942 | N | 0.642 | 0.504 | None | gnomAD-4.0.0 | 9.30923E-05 | None | None | None | None | N | None | 1.33665E-05 | 1.66856E-05 | None | 0 | 0 | None | 0 | 0 | 1.24662E-04 | 0 | 1.60308E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.352 | ambiguous | 0.2745 | benign | -0.339 | Destabilizing | 0.698 | D | 0.509 | neutral | N | 0.500029114 | None | None | N |
D/C | 0.8345 | likely_pathogenic | 0.7529 | pathogenic | -0.165 | Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | N |
D/E | 0.1762 | likely_benign | 0.135 | benign | -0.379 | Destabilizing | 0.006 | N | 0.181 | neutral | N | 0.392861576 | None | None | N |
D/F | 0.8338 | likely_pathogenic | 0.7542 | pathogenic | -0.054 | Destabilizing | 0.993 | D | 0.651 | neutral | None | None | None | None | N |
D/G | 0.2947 | likely_benign | 0.2356 | benign | -0.587 | Destabilizing | 0.822 | D | 0.548 | neutral | N | 0.513921131 | None | None | N |
D/H | 0.5831 | likely_pathogenic | 0.4679 | ambiguous | 0.048 | Stabilizing | 0.992 | D | 0.59 | neutral | N | 0.46913074 | None | None | N |
D/I | 0.6852 | likely_pathogenic | 0.5567 | ambiguous | 0.282 | Stabilizing | 0.978 | D | 0.664 | neutral | None | None | None | None | N |
D/K | 0.6535 | likely_pathogenic | 0.5423 | ambiguous | 0.121 | Stabilizing | 0.754 | D | 0.515 | neutral | None | None | None | None | N |
D/L | 0.6889 | likely_pathogenic | 0.5748 | pathogenic | 0.282 | Stabilizing | 0.956 | D | 0.645 | neutral | None | None | None | None | N |
D/M | 0.7878 | likely_pathogenic | 0.6876 | pathogenic | 0.358 | Stabilizing | 0.998 | D | 0.626 | neutral | None | None | None | None | N |
D/N | 0.1615 | likely_benign | 0.1348 | benign | -0.305 | Destabilizing | 0.822 | D | 0.541 | neutral | N | 0.488908043 | None | None | N |
D/P | 0.9539 | likely_pathogenic | 0.9077 | pathogenic | 0.099 | Stabilizing | 0.978 | D | 0.591 | neutral | None | None | None | None | N |
D/Q | 0.5587 | ambiguous | 0.4488 | ambiguous | -0.235 | Destabilizing | 0.915 | D | 0.531 | neutral | None | None | None | None | N |
D/R | 0.7298 | likely_pathogenic | 0.6271 | pathogenic | 0.372 | Stabilizing | 0.956 | D | 0.597 | neutral | None | None | None | None | N |
D/S | 0.2724 | likely_benign | 0.2109 | benign | -0.429 | Destabilizing | 0.754 | D | 0.461 | neutral | None | None | None | None | N |
D/T | 0.4425 | ambiguous | 0.3517 | ambiguous | -0.23 | Destabilizing | 0.956 | D | 0.555 | neutral | None | None | None | None | N |
D/V | 0.4635 | ambiguous | 0.3527 | ambiguous | 0.099 | Stabilizing | 0.942 | D | 0.642 | neutral | N | 0.469509134 | None | None | N |
D/W | 0.953 | likely_pathogenic | 0.9213 | pathogenic | 0.132 | Stabilizing | 0.998 | D | 0.631 | neutral | None | None | None | None | N |
D/Y | 0.4681 | ambiguous | 0.3733 | ambiguous | 0.193 | Stabilizing | 0.99 | D | 0.652 | neutral | N | 0.495628786 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.