Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17395 | 52408;52409;52410 | chr2:178608828;178608827;178608826 | chr2:179473555;179473554;179473553 |
N2AB | 15754 | 47485;47486;47487 | chr2:178608828;178608827;178608826 | chr2:179473555;179473554;179473553 |
N2A | 14827 | 44704;44705;44706 | chr2:178608828;178608827;178608826 | chr2:179473555;179473554;179473553 |
N2B | 8330 | 25213;25214;25215 | chr2:178608828;178608827;178608826 | chr2:179473555;179473554;179473553 |
Novex-1 | 8455 | 25588;25589;25590 | chr2:178608828;178608827;178608826 | chr2:179473555;179473554;179473553 |
Novex-2 | 8522 | 25789;25790;25791 | chr2:178608828;178608827;178608826 | chr2:179473555;179473554;179473553 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1479797110 | None | 1.0 | N | 0.402 | 0.214 | 0.342400092842 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/E | rs1479797110 | None | 1.0 | N | 0.402 | 0.214 | 0.342400092842 | gnomAD-4.0.0 | 4.10842E-06 | None | None | None | None | I | None | 8.98257E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.97463E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8705 | likely_pathogenic | 0.8915 | pathogenic | -0.293 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.486306261 | None | None | I |
D/C | 0.9729 | likely_pathogenic | 0.9752 | pathogenic | 0.123 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/E | 0.6968 | likely_pathogenic | 0.7422 | pathogenic | -0.311 | Destabilizing | 1.0 | D | 0.402 | neutral | N | 0.478722164 | None | None | I |
D/F | 0.9588 | likely_pathogenic | 0.968 | pathogenic | -0.327 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
D/G | 0.8985 | likely_pathogenic | 0.9133 | pathogenic | -0.483 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.497017457 | None | None | I |
D/H | 0.9084 | likely_pathogenic | 0.9255 | pathogenic | -0.27 | Destabilizing | 1.0 | D | 0.644 | neutral | N | 0.482369468 | None | None | I |
D/I | 0.9299 | likely_pathogenic | 0.9536 | pathogenic | 0.159 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
D/K | 0.9609 | likely_pathogenic | 0.9699 | pathogenic | 0.3 | Stabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | I |
D/L | 0.9055 | likely_pathogenic | 0.9312 | pathogenic | 0.159 | Stabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
D/M | 0.9742 | likely_pathogenic | 0.9795 | pathogenic | 0.379 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
D/N | 0.5618 | ambiguous | 0.5973 | pathogenic | 0.058 | Stabilizing | 1.0 | D | 0.668 | neutral | N | 0.470973483 | None | None | I |
D/P | 0.9952 | likely_pathogenic | 0.9964 | pathogenic | 0.03 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
D/Q | 0.9209 | likely_pathogenic | 0.9343 | pathogenic | 0.089 | Stabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
D/R | 0.9525 | likely_pathogenic | 0.9588 | pathogenic | 0.387 | Stabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
D/S | 0.7807 | likely_pathogenic | 0.7965 | pathogenic | -0.046 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
D/T | 0.9033 | likely_pathogenic | 0.9265 | pathogenic | 0.101 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
D/V | 0.8472 | likely_pathogenic | 0.8838 | pathogenic | 0.03 | Stabilizing | 1.0 | D | 0.768 | deleterious | N | 0.4942063 | None | None | I |
D/W | 0.9895 | likely_pathogenic | 0.9911 | pathogenic | -0.226 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
D/Y | 0.8136 | likely_pathogenic | 0.8556 | pathogenic | -0.101 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.512342263 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.