Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17406 | 52441;52442;52443 | chr2:178608795;178608794;178608793 | chr2:179473522;179473521;179473520 |
N2AB | 15765 | 47518;47519;47520 | chr2:178608795;178608794;178608793 | chr2:179473522;179473521;179473520 |
N2A | 14838 | 44737;44738;44739 | chr2:178608795;178608794;178608793 | chr2:179473522;179473521;179473520 |
N2B | 8341 | 25246;25247;25248 | chr2:178608795;178608794;178608793 | chr2:179473522;179473521;179473520 |
Novex-1 | 8466 | 25621;25622;25623 | chr2:178608795;178608794;178608793 | chr2:179473522;179473521;179473520 |
Novex-2 | 8533 | 25822;25823;25824 | chr2:178608795;178608794;178608793 | chr2:179473522;179473521;179473520 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs1370237214 | None | 0.999 | N | 0.858 | 0.582 | 0.816087557028 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9378 | likely_pathogenic | 0.947 | pathogenic | -2.901 | Highly Destabilizing | 0.997 | D | 0.71 | prob.delet. | None | None | None | None | N |
L/C | 0.9429 | likely_pathogenic | 0.9501 | pathogenic | -1.886 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -3.533 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
L/E | 0.9979 | likely_pathogenic | 0.998 | pathogenic | -3.195 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/F | 0.8157 | likely_pathogenic | 0.812 | pathogenic | -1.731 | Destabilizing | 0.999 | D | 0.775 | deleterious | N | 0.508154088 | None | None | N |
L/G | 0.9962 | likely_pathogenic | 0.9966 | pathogenic | -3.517 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/H | 0.9969 | likely_pathogenic | 0.9972 | pathogenic | -3.19 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/I | 0.1369 | likely_benign | 0.1261 | benign | -1.024 | Destabilizing | 0.994 | D | 0.628 | neutral | None | None | None | None | N |
L/K | 0.997 | likely_pathogenic | 0.997 | pathogenic | -2.192 | Highly Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
L/M | 0.358 | ambiguous | 0.3362 | benign | -1.178 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | N | 0.473667098 | None | None | N |
L/N | 0.9989 | likely_pathogenic | 0.999 | pathogenic | -2.979 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
L/P | 0.9979 | likely_pathogenic | 0.9981 | pathogenic | -1.644 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/Q | 0.9945 | likely_pathogenic | 0.9948 | pathogenic | -2.577 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
L/R | 0.9937 | likely_pathogenic | 0.9939 | pathogenic | -2.325 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
L/S | 0.9967 | likely_pathogenic | 0.997 | pathogenic | -3.484 | Highly Destabilizing | 0.999 | D | 0.858 | deleterious | N | 0.508407577 | None | None | N |
L/T | 0.964 | likely_pathogenic | 0.9666 | pathogenic | -2.976 | Highly Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
L/V | 0.1214 | likely_benign | 0.1247 | benign | -1.644 | Destabilizing | 0.767 | D | 0.403 | neutral | N | 0.375016816 | None | None | N |
L/W | 0.9887 | likely_pathogenic | 0.9878 | pathogenic | -2.061 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.508407577 | None | None | N |
L/Y | 0.9903 | likely_pathogenic | 0.9902 | pathogenic | -1.923 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.