Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17413 | 52462;52463;52464 | chr2:178608774;178608773;178608772 | chr2:179473501;179473500;179473499 |
N2AB | 15772 | 47539;47540;47541 | chr2:178608774;178608773;178608772 | chr2:179473501;179473500;179473499 |
N2A | 14845 | 44758;44759;44760 | chr2:178608774;178608773;178608772 | chr2:179473501;179473500;179473499 |
N2B | 8348 | 25267;25268;25269 | chr2:178608774;178608773;178608772 | chr2:179473501;179473500;179473499 |
Novex-1 | 8473 | 25642;25643;25644 | chr2:178608774;178608773;178608772 | chr2:179473501;179473500;179473499 |
Novex-2 | 8540 | 25843;25844;25845 | chr2:178608774;178608773;178608772 | chr2:179473501;179473500;179473499 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs749984408 | -0.511 | 0.999 | N | 0.577 | 0.219 | 0.209622950755 | gnomAD-4.0.0 | 3.18786E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88608E-05 | 0 | 2.86226E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.498 | ambiguous | 0.3985 | ambiguous | -0.073 | Destabilizing | 0.998 | D | 0.425 | neutral | None | None | None | None | N |
K/C | 0.8067 | likely_pathogenic | 0.7309 | pathogenic | -0.068 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/D | 0.729 | likely_pathogenic | 0.6659 | pathogenic | 0.019 | Stabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
K/E | 0.3951 | ambiguous | 0.3213 | benign | 0.018 | Stabilizing | 0.996 | D | 0.371 | neutral | N | 0.492524352 | None | None | N |
K/F | 0.8812 | likely_pathogenic | 0.8139 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/G | 0.6631 | likely_pathogenic | 0.557 | ambiguous | -0.283 | Destabilizing | 1.0 | D | 0.54 | neutral | None | None | None | None | N |
K/H | 0.3901 | ambiguous | 0.3348 | benign | -0.723 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
K/I | 0.4751 | ambiguous | 0.3894 | ambiguous | 0.404 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | D | 0.523484764 | None | None | N |
K/L | 0.4719 | ambiguous | 0.3881 | ambiguous | 0.404 | Stabilizing | 1.0 | D | 0.54 | neutral | None | None | None | None | N |
K/M | 0.4083 | ambiguous | 0.3274 | benign | 0.427 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
K/N | 0.5747 | likely_pathogenic | 0.5027 | ambiguous | 0.291 | Stabilizing | 0.999 | D | 0.577 | neutral | N | 0.494084576 | None | None | N |
K/P | 0.9188 | likely_pathogenic | 0.865 | pathogenic | 0.273 | Stabilizing | 1.0 | D | 0.598 | neutral | None | None | None | None | N |
K/Q | 0.2098 | likely_benign | 0.1754 | benign | 0.045 | Stabilizing | 0.999 | D | 0.566 | neutral | N | 0.49981847 | None | None | N |
K/R | 0.0951 | likely_benign | 0.086 | benign | -0.035 | Destabilizing | 0.64 | D | 0.225 | neutral | N | 0.436249781 | None | None | N |
K/S | 0.5722 | likely_pathogenic | 0.4857 | ambiguous | -0.225 | Destabilizing | 0.998 | D | 0.451 | neutral | None | None | None | None | N |
K/T | 0.3595 | ambiguous | 0.2829 | benign | -0.077 | Destabilizing | 0.999 | D | 0.571 | neutral | N | 0.450928445 | None | None | N |
K/V | 0.4441 | ambiguous | 0.3594 | ambiguous | 0.273 | Stabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
K/W | 0.8889 | likely_pathogenic | 0.824 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
K/Y | 0.7608 | likely_pathogenic | 0.6824 | pathogenic | 0.055 | Stabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.