Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17417 | 52474;52475;52476 | chr2:178608762;178608761;178608760 | chr2:179473489;179473488;179473487 |
N2AB | 15776 | 47551;47552;47553 | chr2:178608762;178608761;178608760 | chr2:179473489;179473488;179473487 |
N2A | 14849 | 44770;44771;44772 | chr2:178608762;178608761;178608760 | chr2:179473489;179473488;179473487 |
N2B | 8352 | 25279;25280;25281 | chr2:178608762;178608761;178608760 | chr2:179473489;179473488;179473487 |
Novex-1 | 8477 | 25654;25655;25656 | chr2:178608762;178608761;178608760 | chr2:179473489;179473488;179473487 |
Novex-2 | 8544 | 25855;25856;25857 | chr2:178608762;178608761;178608760 | chr2:179473489;179473488;179473487 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1316644497 | -1.401 | None | N | 0.209 | 0.132 | 0.238096912614 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/G | rs1316644497 | -1.401 | None | N | 0.209 | 0.132 | 0.238096912614 | gnomAD-4.0.0 | 1.59375E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43328E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1725 | likely_benign | 0.1652 | benign | -0.241 | Destabilizing | 0.012 | N | 0.309 | neutral | N | 0.475517458 | None | None | N |
E/C | 0.8033 | likely_pathogenic | 0.7527 | pathogenic | -0.327 | Destabilizing | 0.864 | D | 0.323 | neutral | None | None | None | None | N |
E/D | 0.0752 | likely_benign | 0.0731 | benign | -0.24 | Destabilizing | None | N | 0.111 | neutral | N | 0.470458355 | None | None | N |
E/F | 0.8264 | likely_pathogenic | 0.7582 | pathogenic | -0.086 | Destabilizing | 0.628 | D | 0.327 | neutral | None | None | None | None | N |
E/G | 0.1551 | likely_benign | 0.1499 | benign | -0.404 | Destabilizing | None | N | 0.209 | neutral | N | 0.405446872 | None | None | N |
E/H | 0.4986 | ambiguous | 0.4395 | ambiguous | 0.47 | Stabilizing | 0.356 | N | 0.233 | neutral | None | None | None | None | N |
E/I | 0.4581 | ambiguous | 0.4036 | ambiguous | 0.148 | Stabilizing | 0.356 | N | 0.341 | neutral | None | None | None | None | N |
E/K | 0.2446 | likely_benign | 0.207 | benign | 0.235 | Stabilizing | 0.055 | N | 0.213 | neutral | N | 0.465263179 | None | None | N |
E/L | 0.4661 | ambiguous | 0.4231 | ambiguous | 0.148 | Stabilizing | 0.072 | N | 0.305 | neutral | None | None | None | None | N |
E/M | 0.591 | likely_pathogenic | 0.5371 | ambiguous | -0.045 | Destabilizing | 0.864 | D | 0.299 | neutral | None | None | None | None | N |
E/N | 0.2013 | likely_benign | 0.1791 | benign | -0.086 | Destabilizing | 0.038 | N | 0.191 | neutral | None | None | None | None | N |
E/P | 0.2945 | likely_benign | 0.2841 | benign | 0.037 | Stabilizing | 0.136 | N | 0.273 | neutral | None | None | None | None | N |
E/Q | 0.1874 | likely_benign | 0.1701 | benign | -0.039 | Destabilizing | 0.055 | N | 0.253 | neutral | N | 0.465783254 | None | None | N |
E/R | 0.3965 | ambiguous | 0.3297 | benign | 0.572 | Stabilizing | 0.072 | N | 0.239 | neutral | None | None | None | None | N |
E/S | 0.1755 | likely_benign | 0.1614 | benign | -0.256 | Destabilizing | 0.016 | N | 0.246 | neutral | None | None | None | None | N |
E/T | 0.2476 | likely_benign | 0.2287 | benign | -0.113 | Destabilizing | 0.072 | N | 0.259 | neutral | None | None | None | None | N |
E/V | 0.2906 | likely_benign | 0.2614 | benign | 0.037 | Stabilizing | 0.106 | N | 0.305 | neutral | N | 0.483155507 | None | None | N |
E/W | 0.9319 | likely_pathogenic | 0.8994 | pathogenic | 0.045 | Stabilizing | 0.864 | D | 0.341 | neutral | None | None | None | None | N |
E/Y | 0.6752 | likely_pathogenic | 0.5882 | pathogenic | 0.15 | Stabilizing | 0.628 | D | 0.301 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.