Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1742 | 5449;5450;5451 | chr2:178776640;178776639;178776638 | chr2:179641367;179641366;179641365 |
N2AB | 1742 | 5449;5450;5451 | chr2:178776640;178776639;178776638 | chr2:179641367;179641366;179641365 |
N2A | 1742 | 5449;5450;5451 | chr2:178776640;178776639;178776638 | chr2:179641367;179641366;179641365 |
N2B | 1696 | 5311;5312;5313 | chr2:178776640;178776639;178776638 | chr2:179641367;179641366;179641365 |
Novex-1 | 1696 | 5311;5312;5313 | chr2:178776640;178776639;178776638 | chr2:179641367;179641366;179641365 |
Novex-2 | 1696 | 5311;5312;5313 | chr2:178776640;178776639;178776638 | chr2:179641367;179641366;179641365 |
Novex-3 | 1742 | 5449;5450;5451 | chr2:178776640;178776639;178776638 | chr2:179641367;179641366;179641365 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 0.992 | D | 0.464 | 0.813 | 0.526437037968 | gnomAD-4.0.0 | 1.59067E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85651E-06 | 0 | 0 |
G/R | None | None | 0.999 | D | 0.717 | 0.686 | 0.826022559999 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.6625 | likely_pathogenic | 0.6788 | pathogenic | -0.371 | Destabilizing | 0.992 | D | 0.464 | neutral | D | 0.726284166 | None | None | N |
G/C | 0.8772 | likely_pathogenic | 0.8698 | pathogenic | -0.826 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
G/D | 0.6483 | likely_pathogenic | 0.6613 | pathogenic | -0.836 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
G/E | 0.7232 | likely_pathogenic | 0.7402 | pathogenic | -0.998 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | D | 0.705153973 | None | None | N |
G/F | 0.9866 | likely_pathogenic | 0.9882 | pathogenic | -1.053 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
G/H | 0.8613 | likely_pathogenic | 0.869 | pathogenic | -0.684 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
G/I | 0.9744 | likely_pathogenic | 0.9768 | pathogenic | -0.455 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
G/K | 0.8764 | likely_pathogenic | 0.8796 | pathogenic | -1.025 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
G/L | 0.9546 | likely_pathogenic | 0.9583 | pathogenic | -0.455 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
G/M | 0.9542 | likely_pathogenic | 0.9578 | pathogenic | -0.436 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
G/N | 0.4785 | ambiguous | 0.4845 | ambiguous | -0.582 | Destabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | N |
G/P | 0.9989 | likely_pathogenic | 0.9992 | pathogenic | -0.392 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
G/Q | 0.6994 | likely_pathogenic | 0.7177 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
G/R | 0.7939 | likely_pathogenic | 0.8036 | pathogenic | -0.524 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | D | 0.709168081 | None | None | N |
G/S | 0.235 | likely_benign | 0.2457 | benign | -0.701 | Destabilizing | 0.927 | D | 0.401 | neutral | None | None | None | None | N |
G/T | 0.7701 | likely_pathogenic | 0.7882 | pathogenic | -0.801 | Destabilizing | 0.998 | D | 0.716 | prob.delet. | None | None | None | None | N |
G/V | 0.95 | likely_pathogenic | 0.9545 | pathogenic | -0.392 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | D | 0.796931912 | None | None | N |
G/W | 0.979 | likely_pathogenic | 0.9815 | pathogenic | -1.226 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
G/Y | 0.9646 | likely_pathogenic | 0.9676 | pathogenic | -0.887 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.