Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17440 | 52543;52544;52545 | chr2:178608693;178608692;178608691 | chr2:179473420;179473419;179473418 |
N2AB | 15799 | 47620;47621;47622 | chr2:178608693;178608692;178608691 | chr2:179473420;179473419;179473418 |
N2A | 14872 | 44839;44840;44841 | chr2:178608693;178608692;178608691 | chr2:179473420;179473419;179473418 |
N2B | 8375 | 25348;25349;25350 | chr2:178608693;178608692;178608691 | chr2:179473420;179473419;179473418 |
Novex-1 | 8500 | 25723;25724;25725 | chr2:178608693;178608692;178608691 | chr2:179473420;179473419;179473418 |
Novex-2 | 8567 | 25924;25925;25926 | chr2:178608693;178608692;178608691 | chr2:179473420;179473419;179473418 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs2055527887 | None | 1.0 | N | 0.753 | 0.563 | 0.471052466308 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.95236E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs2055527887 | None | 1.0 | N | 0.753 | 0.563 | 0.471052466308 | gnomAD-4.0.0 | 2.5668E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.44427E-05 | None | 0 | 0 | 0 | 0 | 2.85095E-05 |
E/K | None | None | 0.999 | N | 0.61 | 0.394 | 0.383921772103 | gnomAD-4.0.0 | 1.59447E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43419E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2645 | likely_benign | 0.2459 | benign | -0.973 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.484588422 | None | None | N |
E/C | 0.89 | likely_pathogenic | 0.8932 | pathogenic | -0.517 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/D | 0.2506 | likely_benign | 0.2959 | benign | -1.333 | Destabilizing | 0.999 | D | 0.493 | neutral | N | 0.478814751 | None | None | N |
E/F | 0.9031 | likely_pathogenic | 0.9074 | pathogenic | -0.322 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
E/G | 0.4522 | ambiguous | 0.4261 | ambiguous | -1.41 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.493084345 | None | None | N |
E/H | 0.7059 | likely_pathogenic | 0.6922 | pathogenic | -0.634 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
E/I | 0.4583 | ambiguous | 0.4598 | ambiguous | 0.252 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/K | 0.4163 | ambiguous | 0.3866 | ambiguous | -0.888 | Destabilizing | 0.999 | D | 0.61 | neutral | N | 0.469722943 | None | None | N |
E/L | 0.6146 | likely_pathogenic | 0.6065 | pathogenic | 0.252 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/M | 0.619 | likely_pathogenic | 0.589 | pathogenic | 0.866 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/N | 0.4321 | ambiguous | 0.4632 | ambiguous | -1.399 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/P | 0.6865 | likely_pathogenic | 0.7347 | pathogenic | -0.136 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/Q | 0.2325 | likely_benign | 0.2086 | benign | -1.174 | Destabilizing | 1.0 | D | 0.627 | neutral | N | 0.471724406 | None | None | N |
E/R | 0.5495 | ambiguous | 0.5272 | ambiguous | -0.675 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/S | 0.3489 | ambiguous | 0.3464 | ambiguous | -1.872 | Destabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | N |
E/T | 0.314 | likely_benign | 0.3061 | benign | -1.487 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/V | 0.2859 | likely_benign | 0.2781 | benign | -0.136 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.480335688 | None | None | N |
E/W | 0.9582 | likely_pathogenic | 0.9581 | pathogenic | -0.128 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/Y | 0.8023 | likely_pathogenic | 0.8109 | pathogenic | -0.06 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.