Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17446 | 52561;52562;52563 | chr2:178608675;178608674;178608673 | chr2:179473402;179473401;179473400 |
N2AB | 15805 | 47638;47639;47640 | chr2:178608675;178608674;178608673 | chr2:179473402;179473401;179473400 |
N2A | 14878 | 44857;44858;44859 | chr2:178608675;178608674;178608673 | chr2:179473402;179473401;179473400 |
N2B | 8381 | 25366;25367;25368 | chr2:178608675;178608674;178608673 | chr2:179473402;179473401;179473400 |
Novex-1 | 8506 | 25741;25742;25743 | chr2:178608675;178608674;178608673 | chr2:179473402;179473401;179473400 |
Novex-2 | 8573 | 25942;25943;25944 | chr2:178608675;178608674;178608673 | chr2:179473402;179473401;179473400 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | None | N | 0.164 | 0.112 | 0.234412748748 | gnomAD-4.0.0 | 4.10947E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.40011E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5267 | ambiguous | 0.4808 | ambiguous | -1.394 | Destabilizing | 0.016 | N | 0.362 | neutral | None | None | None | None | I |
R/C | 0.1949 | likely_benign | 0.1626 | benign | -1.634 | Destabilizing | 0.901 | D | 0.703 | prob.neutral | None | None | None | None | I |
R/D | 0.9146 | likely_pathogenic | 0.9033 | pathogenic | -0.855 | Destabilizing | 0.148 | N | 0.597 | neutral | None | None | None | None | I |
R/E | 0.621 | likely_pathogenic | 0.5906 | pathogenic | -0.7 | Destabilizing | 0.08 | N | 0.429 | neutral | None | None | None | None | I |
R/F | 0.5894 | likely_pathogenic | 0.512 | ambiguous | -1.049 | Destabilizing | 0.001 | N | 0.485 | neutral | None | None | None | None | I |
R/G | 0.5301 | ambiguous | 0.4737 | ambiguous | -1.71 | Destabilizing | 0.116 | N | 0.473 | neutral | N | 0.487310674 | None | None | I |
R/H | 0.1622 | likely_benign | 0.1333 | benign | -1.644 | Destabilizing | 0.749 | D | 0.529 | neutral | None | None | None | None | I |
R/I | 0.3736 | ambiguous | 0.335 | benign | -0.516 | Destabilizing | 0.061 | N | 0.524 | neutral | N | 0.485985168 | None | None | I |
R/K | 0.1539 | likely_benign | 0.1304 | benign | -1.488 | Destabilizing | None | N | 0.164 | neutral | N | 0.469148847 | None | None | I |
R/L | 0.3534 | ambiguous | 0.3063 | benign | -0.516 | Destabilizing | 0.036 | N | 0.436 | neutral | None | None | None | None | I |
R/M | 0.2996 | likely_benign | 0.2558 | benign | -0.889 | Destabilizing | 0.749 | D | 0.651 | neutral | None | None | None | None | I |
R/N | 0.7647 | likely_pathogenic | 0.7177 | pathogenic | -1.161 | Destabilizing | 0.148 | N | 0.526 | neutral | None | None | None | None | I |
R/P | 0.9882 | likely_pathogenic | 0.988 | pathogenic | -0.792 | Destabilizing | 0.46 | N | 0.68 | prob.neutral | None | None | None | None | I |
R/Q | 0.1472 | likely_benign | 0.1305 | benign | -1.212 | Destabilizing | 0.174 | N | 0.589 | neutral | None | None | None | None | I |
R/S | 0.549 | ambiguous | 0.4828 | ambiguous | -1.932 | Destabilizing | 0.005 | N | 0.267 | neutral | N | 0.427977015 | None | None | I |
R/T | 0.2867 | likely_benign | 0.236 | benign | -1.59 | Destabilizing | 0.001 | N | 0.257 | neutral | N | 0.443541113 | None | None | I |
R/V | 0.4098 | ambiguous | 0.3731 | ambiguous | -0.792 | Destabilizing | 0.001 | N | 0.454 | neutral | None | None | None | None | I |
R/W | 0.2674 | likely_benign | 0.227 | benign | -0.659 | Destabilizing | 0.972 | D | 0.705 | prob.neutral | None | None | None | None | I |
R/Y | 0.503 | ambiguous | 0.4358 | ambiguous | -0.373 | Destabilizing | 0.174 | N | 0.671 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.