Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17480 | 52663;52664;52665 | chr2:178608445;178608444;178608443 | chr2:179473172;179473171;179473170 |
N2AB | 15839 | 47740;47741;47742 | chr2:178608445;178608444;178608443 | chr2:179473172;179473171;179473170 |
N2A | 14912 | 44959;44960;44961 | chr2:178608445;178608444;178608443 | chr2:179473172;179473171;179473170 |
N2B | 8415 | 25468;25469;25470 | chr2:178608445;178608444;178608443 | chr2:179473172;179473171;179473170 |
Novex-1 | 8540 | 25843;25844;25845 | chr2:178608445;178608444;178608443 | chr2:179473172;179473171;179473170 |
Novex-2 | 8607 | 26044;26045;26046 | chr2:178608445;178608444;178608443 | chr2:179473172;179473171;179473170 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs2055452595 | None | 0.684 | N | 0.409 | 0.103 | 0.21737058555 | gnomAD-4.0.0 | 8.25532E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.08341E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2057 | likely_benign | 0.1815 | benign | -0.563 | Destabilizing | 0.684 | D | 0.335 | neutral | N | 0.463551026 | None | None | N |
E/C | 0.8188 | likely_pathogenic | 0.7808 | pathogenic | -0.388 | Destabilizing | 0.996 | D | 0.447 | neutral | None | None | None | None | N |
E/D | 0.1764 | likely_benign | 0.1659 | benign | -0.753 | Destabilizing | 0.003 | N | 0.095 | neutral | N | 0.45799049 | None | None | N |
E/F | 0.7989 | likely_pathogenic | 0.7618 | pathogenic | -0.02 | Destabilizing | 0.984 | D | 0.411 | neutral | None | None | None | None | N |
E/G | 0.2268 | likely_benign | 0.1925 | benign | -0.871 | Destabilizing | 0.684 | D | 0.372 | neutral | N | 0.458222564 | None | None | N |
E/H | 0.5014 | ambiguous | 0.4634 | ambiguous | 0.006 | Stabilizing | 0.953 | D | 0.383 | neutral | None | None | None | None | N |
E/I | 0.405 | ambiguous | 0.3814 | ambiguous | 0.253 | Stabilizing | 0.953 | D | 0.427 | neutral | None | None | None | None | N |
E/K | 0.209 | likely_benign | 0.1822 | benign | -0.224 | Destabilizing | 0.012 | N | 0.088 | neutral | N | 0.427224866 | None | None | N |
E/L | 0.4372 | ambiguous | 0.3973 | ambiguous | 0.253 | Stabilizing | 0.854 | D | 0.41 | neutral | None | None | None | None | N |
E/M | 0.4752 | ambiguous | 0.4451 | ambiguous | 0.378 | Stabilizing | 0.996 | D | 0.385 | neutral | None | None | None | None | N |
E/N | 0.341 | ambiguous | 0.306 | benign | -0.728 | Destabilizing | 0.037 | N | 0.206 | neutral | None | None | None | None | N |
E/P | 0.9425 | likely_pathogenic | 0.9323 | pathogenic | 0.003 | Stabilizing | 0.953 | D | 0.375 | neutral | None | None | None | None | N |
E/Q | 0.1733 | likely_benign | 0.1557 | benign | -0.614 | Destabilizing | 0.684 | D | 0.409 | neutral | N | 0.460665436 | None | None | N |
E/R | 0.3316 | likely_benign | 0.2943 | benign | 0.139 | Stabilizing | 0.59 | D | 0.364 | neutral | None | None | None | None | N |
E/S | 0.2184 | likely_benign | 0.1949 | benign | -0.938 | Destabilizing | 0.543 | D | 0.353 | neutral | None | None | None | None | N |
E/T | 0.1893 | likely_benign | 0.1715 | benign | -0.684 | Destabilizing | 0.742 | D | 0.325 | neutral | None | None | None | None | N |
E/V | 0.234 | likely_benign | 0.212 | benign | 0.003 | Stabilizing | 0.815 | D | 0.391 | neutral | N | 0.414084998 | None | None | N |
E/W | 0.8925 | likely_pathogenic | 0.8772 | pathogenic | 0.229 | Stabilizing | 0.996 | D | 0.547 | neutral | None | None | None | None | N |
E/Y | 0.679 | likely_pathogenic | 0.6281 | pathogenic | 0.231 | Stabilizing | 0.984 | D | 0.403 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.