Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17506 | 52741;52742;52743 | chr2:178608367;178608366;178608365 | chr2:179473094;179473093;179473092 |
N2AB | 15865 | 47818;47819;47820 | chr2:178608367;178608366;178608365 | chr2:179473094;179473093;179473092 |
N2A | 14938 | 45037;45038;45039 | chr2:178608367;178608366;178608365 | chr2:179473094;179473093;179473092 |
N2B | 8441 | 25546;25547;25548 | chr2:178608367;178608366;178608365 | chr2:179473094;179473093;179473092 |
Novex-1 | 8566 | 25921;25922;25923 | chr2:178608367;178608366;178608365 | chr2:179473094;179473093;179473092 |
Novex-2 | 8633 | 26122;26123;26124 | chr2:178608367;178608366;178608365 | chr2:179473094;179473093;179473092 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.005 | N | 0.242 | 0.065 | 0.335164054921 | gnomAD-4.0.0 | 1.36993E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.32385E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.908 | likely_pathogenic | 0.9235 | pathogenic | -3.047 | Highly Destabilizing | 0.688 | D | 0.627 | neutral | None | None | None | None | N |
L/C | 0.9173 | likely_pathogenic | 0.9338 | pathogenic | -2.048 | Highly Destabilizing | 0.998 | D | 0.76 | deleterious | None | None | None | None | N |
L/D | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -3.841 | Highly Destabilizing | 0.991 | D | 0.854 | deleterious | None | None | None | None | N |
L/E | 0.9935 | likely_pathogenic | 0.9932 | pathogenic | -3.527 | Highly Destabilizing | 0.991 | D | 0.811 | deleterious | None | None | None | None | N |
L/F | 0.8488 | likely_pathogenic | 0.8512 | pathogenic | -1.921 | Destabilizing | 0.934 | D | 0.673 | neutral | N | 0.503710316 | None | None | N |
L/G | 0.9917 | likely_pathogenic | 0.9928 | pathogenic | -3.631 | Highly Destabilizing | 0.991 | D | 0.805 | deleterious | None | None | None | None | N |
L/H | 0.9942 | likely_pathogenic | 0.9938 | pathogenic | -3.216 | Highly Destabilizing | 0.997 | D | 0.851 | deleterious | N | 0.503963806 | None | None | N |
L/I | 0.0849 | likely_benign | 0.101 | benign | -1.276 | Destabilizing | 0.005 | N | 0.242 | neutral | N | 0.386700821 | None | None | N |
L/K | 0.9923 | likely_pathogenic | 0.9899 | pathogenic | -2.57 | Highly Destabilizing | 0.974 | D | 0.775 | deleterious | None | None | None | None | N |
L/M | 0.3226 | likely_benign | 0.3231 | benign | -1.234 | Destabilizing | 0.949 | D | 0.595 | neutral | None | None | None | None | N |
L/N | 0.9962 | likely_pathogenic | 0.9961 | pathogenic | -3.303 | Highly Destabilizing | 0.991 | D | 0.857 | deleterious | None | None | None | None | N |
L/P | 0.9936 | likely_pathogenic | 0.995 | pathogenic | -1.859 | Destabilizing | 0.989 | D | 0.855 | deleterious | N | 0.492442916 | None | None | N |
L/Q | 0.9854 | likely_pathogenic | 0.9826 | pathogenic | -2.982 | Highly Destabilizing | 0.991 | D | 0.833 | deleterious | None | None | None | None | N |
L/R | 0.9873 | likely_pathogenic | 0.9851 | pathogenic | -2.468 | Highly Destabilizing | 0.989 | D | 0.831 | deleterious | N | 0.503963806 | None | None | N |
L/S | 0.9917 | likely_pathogenic | 0.9934 | pathogenic | -3.816 | Highly Destabilizing | 0.915 | D | 0.761 | deleterious | None | None | None | None | N |
L/T | 0.921 | likely_pathogenic | 0.9296 | pathogenic | -3.349 | Highly Destabilizing | 0.842 | D | 0.625 | neutral | None | None | None | None | N |
L/V | 0.1056 | likely_benign | 0.1289 | benign | -1.859 | Destabilizing | 0.007 | N | 0.265 | neutral | N | 0.364242462 | None | None | N |
L/W | 0.9842 | likely_pathogenic | 0.983 | pathogenic | -2.338 | Highly Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | N |
L/Y | 0.9865 | likely_pathogenic | 0.9847 | pathogenic | -2.146 | Highly Destabilizing | 0.991 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.