Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1751 | 5476;5477;5478 | chr2:178776613;178776612;178776611 | chr2:179641340;179641339;179641338 |
N2AB | 1751 | 5476;5477;5478 | chr2:178776613;178776612;178776611 | chr2:179641340;179641339;179641338 |
N2A | 1751 | 5476;5477;5478 | chr2:178776613;178776612;178776611 | chr2:179641340;179641339;179641338 |
N2B | 1705 | 5338;5339;5340 | chr2:178776613;178776612;178776611 | chr2:179641340;179641339;179641338 |
Novex-1 | 1705 | 5338;5339;5340 | chr2:178776613;178776612;178776611 | chr2:179641340;179641339;179641338 |
Novex-2 | 1705 | 5338;5339;5340 | chr2:178776613;178776612;178776611 | chr2:179641340;179641339;179641338 |
Novex-3 | 1751 | 5476;5477;5478 | chr2:178776613;178776612;178776611 | chr2:179641340;179641339;179641338 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1234295408 | None | 0.64 | N | 0.357 | 0.263 | 0.462374447365 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/F | rs1234295408 | None | 0.64 | N | 0.357 | 0.263 | 0.462374447365 | gnomAD-4.0.0 | 6.57082E-06 | None | None | None | None | N | None | 2.41313E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.943 | likely_pathogenic | 0.9446 | pathogenic | -2.175 | Highly Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | N |
L/C | 0.9634 | likely_pathogenic | 0.9624 | pathogenic | -1.35 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
L/D | 0.9982 | likely_pathogenic | 0.9988 | pathogenic | -1.631 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/E | 0.9818 | likely_pathogenic | 0.9879 | pathogenic | -1.503 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/F | 0.7546 | likely_pathogenic | 0.7353 | pathogenic | -1.335 | Destabilizing | 0.64 | D | 0.357 | neutral | N | 0.422508321 | None | None | N |
L/G | 0.988 | likely_pathogenic | 0.9897 | pathogenic | -2.641 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/H | 0.9629 | likely_pathogenic | 0.9686 | pathogenic | -1.891 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.497121485 | None | None | N |
L/I | 0.2996 | likely_benign | 0.2783 | benign | -0.889 | Destabilizing | 0.996 | D | 0.49 | neutral | N | 0.407205951 | None | None | N |
L/K | 0.9584 | likely_pathogenic | 0.9742 | pathogenic | -1.507 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
L/M | 0.418 | ambiguous | 0.4066 | ambiguous | -0.72 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
L/N | 0.9837 | likely_pathogenic | 0.9867 | pathogenic | -1.513 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
L/P | 0.9935 | likely_pathogenic | 0.9954 | pathogenic | -1.292 | Destabilizing | 1.0 | D | 0.871 | deleterious | N | 0.515795597 | None | None | N |
L/Q | 0.9175 | likely_pathogenic | 0.9401 | pathogenic | -1.513 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
L/R | 0.9434 | likely_pathogenic | 0.9611 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.853 | deleterious | N | 0.513196832 | None | None | N |
L/S | 0.9829 | likely_pathogenic | 0.9848 | pathogenic | -2.267 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/T | 0.9346 | likely_pathogenic | 0.9402 | pathogenic | -1.999 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
L/V | 0.3841 | ambiguous | 0.3569 | ambiguous | -1.292 | Destabilizing | 0.996 | D | 0.473 | neutral | N | 0.443085517 | None | None | N |
L/W | 0.9413 | likely_pathogenic | 0.9443 | pathogenic | -1.539 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
L/Y | 0.9473 | likely_pathogenic | 0.9459 | pathogenic | -1.282 | Destabilizing | 0.998 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.