Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17515 | 52768;52769;52770 | chr2:178608340;178608339;178608338 | chr2:179473067;179473066;179473065 |
N2AB | 15874 | 47845;47846;47847 | chr2:178608340;178608339;178608338 | chr2:179473067;179473066;179473065 |
N2A | 14947 | 45064;45065;45066 | chr2:178608340;178608339;178608338 | chr2:179473067;179473066;179473065 |
N2B | 8450 | 25573;25574;25575 | chr2:178608340;178608339;178608338 | chr2:179473067;179473066;179473065 |
Novex-1 | 8575 | 25948;25949;25950 | chr2:178608340;178608339;178608338 | chr2:179473067;179473066;179473065 |
Novex-2 | 8642 | 26149;26150;26151 | chr2:178608340;178608339;178608338 | chr2:179473067;179473066;179473065 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | rs1576373600 | None | 0.99 | N | 0.451 | 0.35 | 0.269558022972 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
H/N | rs1576373600 | None | 0.99 | N | 0.451 | 0.35 | 0.269558022972 | gnomAD-4.0.0 | 4.34181E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 7.69366E-05 | 0 |
H/P | None | None | 0.999 | N | 0.563 | 0.515 | 0.397838977388 | gnomAD-4.0.0 | 6.84776E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99892E-07 | 0 | 0 |
H/R | rs1319404770 | -0.24 | 0.135 | N | 0.301 | 0.268 | 0.178374595973 | gnomAD-4.0.0 | 4.79343E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29925E-06 | 0 | 0 |
H/Y | None | None | 0.997 | N | 0.405 | 0.479 | 0.313210971179 | gnomAD-4.0.0 | 2.05436E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.53575E-05 | None | 0 | 0 | 1.79978E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7476 | likely_pathogenic | 0.6092 | pathogenic | 0.289 | Stabilizing | 0.993 | D | 0.459 | neutral | None | None | None | None | I |
H/C | 0.4464 | ambiguous | 0.3644 | ambiguous | 0.607 | Stabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | I |
H/D | 0.8681 | likely_pathogenic | 0.7454 | pathogenic | -0.035 | Destabilizing | 0.997 | D | 0.412 | neutral | N | 0.429723667 | None | None | I |
H/E | 0.8829 | likely_pathogenic | 0.7741 | pathogenic | -0.018 | Destabilizing | 0.985 | D | 0.404 | neutral | None | None | None | None | I |
H/F | 0.4395 | ambiguous | 0.4215 | ambiguous | 0.894 | Stabilizing | 0.999 | D | 0.444 | neutral | None | None | None | None | I |
H/G | 0.7975 | likely_pathogenic | 0.6908 | pathogenic | 0.034 | Stabilizing | 0.993 | D | 0.456 | neutral | None | None | None | None | I |
H/I | 0.6375 | likely_pathogenic | 0.5371 | ambiguous | 0.929 | Stabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | I |
H/K | 0.7208 | likely_pathogenic | 0.5721 | pathogenic | 0.27 | Stabilizing | 0.971 | D | 0.42 | neutral | None | None | None | None | I |
H/L | 0.3388 | likely_benign | 0.272 | benign | 0.929 | Stabilizing | 0.997 | D | 0.535 | neutral | N | 0.410812619 | None | None | I |
H/M | 0.7392 | likely_pathogenic | 0.6676 | pathogenic | 0.662 | Stabilizing | 1.0 | D | 0.579 | neutral | None | None | None | None | I |
H/N | 0.4025 | ambiguous | 0.2976 | benign | 0.197 | Stabilizing | 0.99 | D | 0.451 | neutral | N | 0.442519606 | None | None | I |
H/P | 0.8274 | likely_pathogenic | 0.7217 | pathogenic | 0.74 | Stabilizing | 0.999 | D | 0.563 | neutral | N | 0.451293804 | None | None | I |
H/Q | 0.5959 | likely_pathogenic | 0.471 | ambiguous | 0.281 | Stabilizing | 0.994 | D | 0.403 | neutral | N | 0.439113941 | None | None | I |
H/R | 0.3818 | ambiguous | 0.2687 | benign | -0.231 | Destabilizing | 0.135 | N | 0.301 | neutral | N | 0.374910534 | None | None | I |
H/S | 0.6671 | likely_pathogenic | 0.5322 | ambiguous | 0.273 | Stabilizing | 0.993 | D | 0.415 | neutral | None | None | None | None | I |
H/T | 0.7378 | likely_pathogenic | 0.6135 | pathogenic | 0.391 | Stabilizing | 0.998 | D | 0.493 | neutral | None | None | None | None | I |
H/V | 0.5823 | likely_pathogenic | 0.46 | ambiguous | 0.74 | Stabilizing | 0.998 | D | 0.625 | neutral | None | None | None | None | I |
H/W | 0.5622 | ambiguous | 0.5348 | ambiguous | 0.856 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
H/Y | 0.163 | likely_benign | 0.1488 | benign | 1.126 | Stabilizing | 0.997 | D | 0.405 | neutral | N | 0.476768252 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.