Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17541 | 52846;52847;52848 | chr2:178608262;178608261;178608260 | chr2:179472989;179472988;179472987 |
N2AB | 15900 | 47923;47924;47925 | chr2:178608262;178608261;178608260 | chr2:179472989;179472988;179472987 |
N2A | 14973 | 45142;45143;45144 | chr2:178608262;178608261;178608260 | chr2:179472989;179472988;179472987 |
N2B | 8476 | 25651;25652;25653 | chr2:178608262;178608261;178608260 | chr2:179472989;179472988;179472987 |
Novex-1 | 8601 | 26026;26027;26028 | chr2:178608262;178608261;178608260 | chr2:179472989;179472988;179472987 |
Novex-2 | 8668 | 26227;26228;26229 | chr2:178608262;178608261;178608260 | chr2:179472989;179472988;179472987 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs772579140 | -0.908 | 0.011 | N | 0.201 | 0.072 | 0.391470661076 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.69E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5509 | ambiguous | 0.4771 | ambiguous | -1.878 | Destabilizing | 0.78 | D | 0.658 | neutral | N | 0.481520711 | None | None | N |
V/C | 0.838 | likely_pathogenic | 0.8056 | pathogenic | -1.071 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
V/D | 0.9339 | likely_pathogenic | 0.8796 | pathogenic | -2.625 | Highly Destabilizing | 0.995 | D | 0.864 | deleterious | N | 0.455104901 | None | None | N |
V/E | 0.6978 | likely_pathogenic | 0.5917 | pathogenic | -2.354 | Highly Destabilizing | 0.996 | D | 0.803 | deleterious | None | None | None | None | N |
V/F | 0.4816 | ambiguous | 0.3926 | ambiguous | -1.013 | Destabilizing | 0.968 | D | 0.775 | deleterious | N | 0.475384172 | None | None | N |
V/G | 0.787 | likely_pathogenic | 0.7232 | pathogenic | -2.427 | Highly Destabilizing | 0.995 | D | 0.835 | deleterious | N | 0.466786882 | None | None | N |
V/H | 0.9159 | likely_pathogenic | 0.8672 | pathogenic | -2.383 | Highly Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
V/I | 0.0696 | likely_benign | 0.0672 | benign | -0.31 | Destabilizing | 0.011 | N | 0.201 | neutral | N | 0.409679255 | None | None | N |
V/K | 0.8805 | likely_pathogenic | 0.8199 | pathogenic | -1.338 | Destabilizing | 0.988 | D | 0.804 | deleterious | None | None | None | None | N |
V/L | 0.3211 | likely_benign | 0.269 | benign | -0.31 | Destabilizing | 0.437 | N | 0.444 | neutral | N | 0.449005648 | None | None | N |
V/M | 0.257 | likely_benign | 0.2155 | benign | -0.424 | Destabilizing | 0.976 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/N | 0.7583 | likely_pathogenic | 0.6811 | pathogenic | -1.826 | Destabilizing | 0.996 | D | 0.885 | deleterious | None | None | None | None | N |
V/P | 0.9938 | likely_pathogenic | 0.9915 | pathogenic | -0.811 | Destabilizing | 0.996 | D | 0.799 | deleterious | None | None | None | None | N |
V/Q | 0.6686 | likely_pathogenic | 0.5829 | pathogenic | -1.543 | Destabilizing | 0.996 | D | 0.832 | deleterious | None | None | None | None | N |
V/R | 0.8377 | likely_pathogenic | 0.7636 | pathogenic | -1.425 | Destabilizing | 0.996 | D | 0.882 | deleterious | None | None | None | None | N |
V/S | 0.6081 | likely_pathogenic | 0.5175 | ambiguous | -2.333 | Highly Destabilizing | 0.988 | D | 0.766 | deleterious | None | None | None | None | N |
V/T | 0.4433 | ambiguous | 0.3819 | ambiguous | -1.925 | Destabilizing | 0.919 | D | 0.684 | prob.neutral | None | None | None | None | N |
V/W | 0.9722 | likely_pathogenic | 0.9551 | pathogenic | -1.629 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
V/Y | 0.8584 | likely_pathogenic | 0.8074 | pathogenic | -1.215 | Destabilizing | 0.996 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.