Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17549 | 52870;52871;52872 | chr2:178608238;178608237;178608236 | chr2:179472965;179472964;179472963 |
N2AB | 15908 | 47947;47948;47949 | chr2:178608238;178608237;178608236 | chr2:179472965;179472964;179472963 |
N2A | 14981 | 45166;45167;45168 | chr2:178608238;178608237;178608236 | chr2:179472965;179472964;179472963 |
N2B | 8484 | 25675;25676;25677 | chr2:178608238;178608237;178608236 | chr2:179472965;179472964;179472963 |
Novex-1 | 8609 | 26050;26051;26052 | chr2:178608238;178608237;178608236 | chr2:179472965;179472964;179472963 |
Novex-2 | 8676 | 26251;26252;26253 | chr2:178608238;178608237;178608236 | chr2:179472965;179472964;179472963 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/E | None | None | 0.852 | N | 0.35 | 0.257 | 0.387529464389 | gnomAD-4.0.0 | 6.87402E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.66561E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5675 | likely_pathogenic | 0.5799 | pathogenic | -0.804 | Destabilizing | 0.999 | D | 0.256 | neutral | None | None | None | None | I |
A/D | 0.3803 | ambiguous | 0.4339 | ambiguous | -0.553 | Destabilizing | 0.982 | D | 0.475 | neutral | None | None | None | None | I |
A/E | 0.2503 | likely_benign | 0.2703 | benign | -0.712 | Destabilizing | 0.852 | D | 0.35 | neutral | N | 0.455046186 | None | None | I |
A/F | 0.342 | ambiguous | 0.3674 | ambiguous | -0.922 | Destabilizing | 0.982 | D | 0.507 | neutral | None | None | None | None | I |
A/G | 0.2344 | likely_benign | 0.2437 | benign | -0.32 | Destabilizing | 0.959 | D | 0.251 | neutral | N | 0.487961107 | None | None | I |
A/H | 0.4812 | ambiguous | 0.5046 | ambiguous | -0.311 | Destabilizing | 0.998 | D | 0.469 | neutral | None | None | None | None | I |
A/I | 0.1592 | likely_benign | 0.1633 | benign | -0.379 | Destabilizing | 0.17 | N | 0.291 | neutral | None | None | None | None | I |
A/K | 0.3884 | ambiguous | 0.4031 | ambiguous | -0.619 | Destabilizing | 0.884 | D | 0.385 | neutral | None | None | None | None | I |
A/L | 0.1247 | likely_benign | 0.1309 | benign | -0.379 | Destabilizing | 0.046 | N | 0.201 | neutral | None | None | None | None | I |
A/M | 0.1682 | likely_benign | 0.1695 | benign | -0.388 | Destabilizing | 0.982 | D | 0.36 | neutral | None | None | None | None | I |
A/N | 0.2926 | likely_benign | 0.3274 | benign | -0.332 | Destabilizing | 0.991 | D | 0.508 | neutral | None | None | None | None | I |
A/P | 0.5632 | ambiguous | 0.5985 | pathogenic | -0.314 | Destabilizing | 0.996 | D | 0.381 | neutral | N | 0.500415903 | None | None | I |
A/Q | 0.3086 | likely_benign | 0.3118 | benign | -0.633 | Destabilizing | 0.373 | N | 0.223 | neutral | None | None | None | None | I |
A/R | 0.3726 | ambiguous | 0.379 | ambiguous | -0.116 | Destabilizing | 0.982 | D | 0.369 | neutral | None | None | None | None | I |
A/S | 0.1253 | likely_benign | 0.1336 | benign | -0.523 | Destabilizing | 0.92 | D | 0.248 | neutral | N | 0.430342529 | None | None | I |
A/T | 0.0971 | likely_benign | 0.0997 | benign | -0.604 | Destabilizing | 0.959 | D | 0.232 | neutral | N | 0.496623449 | None | None | I |
A/V | 0.0999 | likely_benign | 0.0997 | benign | -0.314 | Destabilizing | 0.704 | D | 0.262 | neutral | N | 0.460492078 | None | None | I |
A/W | 0.7867 | likely_pathogenic | 0.7978 | pathogenic | -1.04 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | I |
A/Y | 0.4888 | ambiguous | 0.5205 | ambiguous | -0.699 | Destabilizing | 0.997 | D | 0.506 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.