Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17558 | 52897;52898;52899 | chr2:178608211;178608210;178608209 | chr2:179472938;179472937;179472936 |
N2AB | 15917 | 47974;47975;47976 | chr2:178608211;178608210;178608209 | chr2:179472938;179472937;179472936 |
N2A | 14990 | 45193;45194;45195 | chr2:178608211;178608210;178608209 | chr2:179472938;179472937;179472936 |
N2B | 8493 | 25702;25703;25704 | chr2:178608211;178608210;178608209 | chr2:179472938;179472937;179472936 |
Novex-1 | 8618 | 26077;26078;26079 | chr2:178608211;178608210;178608209 | chr2:179472938;179472937;179472936 |
Novex-2 | 8685 | 26278;26279;26280 | chr2:178608211;178608210;178608209 | chr2:179472938;179472937;179472936 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs374845620 | -0.809 | 1.0 | N | 0.851 | 0.327 | None | gnomAD-2.1.1 | 4.16E-06 | None | None | None | None | I | None | 6.61E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs374845620 | -0.809 | 1.0 | N | 0.851 | 0.327 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0982 | likely_benign | 0.0938 | benign | -1.648 | Destabilizing | 0.999 | D | 0.861 | deleterious | N | 0.486539742 | None | None | I |
P/C | 0.7542 | likely_pathogenic | 0.6885 | pathogenic | -0.958 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
P/D | 0.906 | likely_pathogenic | 0.8752 | pathogenic | -1.306 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
P/E | 0.6685 | likely_pathogenic | 0.632 | pathogenic | -1.267 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
P/F | 0.8552 | likely_pathogenic | 0.8103 | pathogenic | -1.205 | Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | I |
P/G | 0.7629 | likely_pathogenic | 0.6949 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
P/H | 0.6979 | likely_pathogenic | 0.6399 | pathogenic | -1.501 | Destabilizing | 1.0 | D | 0.894 | deleterious | N | 0.51265295 | None | None | I |
P/I | 0.4662 | ambiguous | 0.4095 | ambiguous | -0.738 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | I |
P/K | 0.8387 | likely_pathogenic | 0.811 | pathogenic | -1.188 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
P/L | 0.3285 | likely_benign | 0.2881 | benign | -0.738 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.468883115 | None | None | I |
P/M | 0.5987 | likely_pathogenic | 0.5554 | ambiguous | -0.528 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
P/N | 0.8403 | likely_pathogenic | 0.7939 | pathogenic | -1.017 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | I |
P/Q | 0.5227 | ambiguous | 0.4729 | ambiguous | -1.144 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
P/R | 0.7174 | likely_pathogenic | 0.6659 | pathogenic | -0.721 | Destabilizing | 1.0 | D | 0.912 | deleterious | N | 0.489015286 | None | None | I |
P/S | 0.3434 | ambiguous | 0.2985 | benign | -1.617 | Destabilizing | 1.0 | D | 0.851 | deleterious | N | 0.513552985 | None | None | I |
P/T | 0.3092 | likely_benign | 0.2549 | benign | -1.463 | Destabilizing | 1.0 | D | 0.849 | deleterious | N | 0.466262995 | None | None | I |
P/V | 0.305 | likely_benign | 0.2668 | benign | -1.007 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
P/W | 0.9526 | likely_pathogenic | 0.9324 | pathogenic | -1.427 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
P/Y | 0.8671 | likely_pathogenic | 0.8269 | pathogenic | -1.121 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.