Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17595 | 53008;53009;53010 | chr2:178608004;178608003;178608002 | chr2:179472731;179472730;179472729 |
N2AB | 15954 | 48085;48086;48087 | chr2:178608004;178608003;178608002 | chr2:179472731;179472730;179472729 |
N2A | 15027 | 45304;45305;45306 | chr2:178608004;178608003;178608002 | chr2:179472731;179472730;179472729 |
N2B | 8530 | 25813;25814;25815 | chr2:178608004;178608003;178608002 | chr2:179472731;179472730;179472729 |
Novex-1 | 8655 | 26188;26189;26190 | chr2:178608004;178608003;178608002 | chr2:179472731;179472730;179472729 |
Novex-2 | 8722 | 26389;26390;26391 | chr2:178608004;178608003;178608002 | chr2:179472731;179472730;179472729 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/V | rs868539342 | None | 0.081 | N | 0.316 | 0.125 | 0.288727942641 | gnomAD-4.0.0 | 1.59314E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86128E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.4075 | ambiguous | 0.3828 | ambiguous | -1.093 | Destabilizing | 0.104 | N | 0.341 | neutral | None | None | None | None | I |
F/C | 0.2427 | likely_benign | 0.2229 | benign | -0.322 | Destabilizing | 0.946 | D | 0.337 | neutral | N | 0.47979741 | None | None | I |
F/D | 0.4404 | ambiguous | 0.3983 | ambiguous | 0.848 | Stabilizing | None | N | 0.129 | neutral | None | None | None | None | I |
F/E | 0.5616 | ambiguous | 0.5216 | ambiguous | 0.829 | Stabilizing | 0.055 | N | 0.373 | neutral | None | None | None | None | I |
F/G | 0.59 | likely_pathogenic | 0.5577 | ambiguous | -1.3 | Destabilizing | 0.104 | N | 0.399 | neutral | None | None | None | None | I |
F/H | 0.3444 | ambiguous | 0.3208 | benign | 0.044 | Stabilizing | 0.497 | N | 0.353 | neutral | None | None | None | None | I |
F/I | 0.2244 | likely_benign | 0.2153 | benign | -0.565 | Destabilizing | 0.175 | N | 0.208 | neutral | N | 0.443740609 | None | None | I |
F/K | 0.6323 | likely_pathogenic | 0.587 | pathogenic | -0.047 | Destabilizing | 0.22 | N | 0.435 | neutral | None | None | None | None | I |
F/L | 0.806 | likely_pathogenic | 0.7723 | pathogenic | -0.565 | Destabilizing | 0.042 | N | 0.251 | neutral | N | 0.477890468 | None | None | I |
F/M | 0.4493 | ambiguous | 0.4506 | ambiguous | -0.318 | Destabilizing | 0.859 | D | 0.267 | neutral | None | None | None | None | I |
F/N | 0.3446 | ambiguous | 0.3043 | benign | 0.097 | Stabilizing | 0.22 | N | 0.447 | neutral | None | None | None | None | I |
F/P | 0.9715 | likely_pathogenic | 0.9733 | pathogenic | -0.721 | Destabilizing | 0.859 | D | 0.423 | neutral | None | None | None | None | I |
F/Q | 0.5319 | ambiguous | 0.4993 | ambiguous | -0.012 | Destabilizing | 0.667 | D | 0.444 | neutral | None | None | None | None | I |
F/R | 0.52 | ambiguous | 0.4775 | ambiguous | 0.455 | Stabilizing | 0.667 | D | 0.426 | neutral | None | None | None | None | I |
F/S | 0.2477 | likely_benign | 0.213 | benign | -0.677 | Destabilizing | 0.175 | N | 0.379 | neutral | N | 0.399872402 | None | None | I |
F/T | 0.3359 | likely_benign | 0.3184 | benign | -0.605 | Destabilizing | 0.364 | N | 0.43 | neutral | None | None | None | None | I |
F/V | 0.1988 | likely_benign | 0.1923 | benign | -0.721 | Destabilizing | 0.081 | N | 0.316 | neutral | N | 0.43898815 | None | None | I |
F/W | 0.3667 | ambiguous | 0.3858 | ambiguous | -0.349 | Destabilizing | 0.667 | D | 0.288 | neutral | None | None | None | None | I |
F/Y | 0.087 | likely_benign | 0.0836 | benign | -0.286 | Destabilizing | None | N | 0.061 | neutral | N | 0.352793318 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.