Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17602 | 53029;53030;53031 | chr2:178607983;178607982;178607981 | chr2:179472710;179472709;179472708 |
N2AB | 15961 | 48106;48107;48108 | chr2:178607983;178607982;178607981 | chr2:179472710;179472709;179472708 |
N2A | 15034 | 45325;45326;45327 | chr2:178607983;178607982;178607981 | chr2:179472710;179472709;179472708 |
N2B | 8537 | 25834;25835;25836 | chr2:178607983;178607982;178607981 | chr2:179472710;179472709;179472708 |
Novex-1 | 8662 | 26209;26210;26211 | chr2:178607983;178607982;178607981 | chr2:179472710;179472709;179472708 |
Novex-2 | 8729 | 26410;26411;26412 | chr2:178607983;178607982;178607981 | chr2:179472710;179472709;179472708 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.059 | 0.185 | 0.132336055621 | gnomAD-4.0.0 | 6.84508E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73671E-04 | 0 | 0 | 0 |
V/L | rs771120988 | -0.153 | None | N | 0.069 | 0.174 | 0.159798565429 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | I | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/L | rs771120988 | -0.153 | None | N | 0.069 | 0.174 | 0.159798565429 | gnomAD-4.0.0 | 1.36902E-06 | None | None | None | None | I | None | 0 | 4.47507E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1097 | likely_benign | 0.0917 | benign | -0.507 | Destabilizing | None | N | 0.094 | neutral | N | 0.453603391 | None | None | I |
V/C | 0.5401 | ambiguous | 0.4734 | ambiguous | -0.651 | Destabilizing | 0.497 | N | 0.315 | neutral | None | None | None | None | I |
V/D | 0.3241 | likely_benign | 0.2582 | benign | -0.367 | Destabilizing | 0.033 | N | 0.485 | neutral | N | 0.413447492 | None | None | I |
V/E | 0.235 | likely_benign | 0.1852 | benign | -0.461 | Destabilizing | 0.044 | N | 0.409 | neutral | None | None | None | None | I |
V/F | 0.1266 | likely_benign | 0.0987 | benign | -0.599 | Destabilizing | None | N | 0.209 | neutral | N | 0.458953283 | None | None | I |
V/G | 0.2062 | likely_benign | 0.1616 | benign | -0.667 | Destabilizing | 0.007 | N | 0.374 | neutral | N | 0.448082928 | None | None | I |
V/H | 0.3506 | ambiguous | 0.2809 | benign | -0.162 | Destabilizing | 0.497 | N | 0.385 | neutral | None | None | None | None | I |
V/I | 0.0608 | likely_benign | 0.0578 | benign | -0.226 | Destabilizing | None | N | 0.059 | neutral | N | 0.372238375 | None | None | I |
V/K | 0.2149 | likely_benign | 0.1704 | benign | -0.537 | Destabilizing | 0.044 | N | 0.411 | neutral | None | None | None | None | I |
V/L | 0.0934 | likely_benign | 0.0799 | benign | -0.226 | Destabilizing | None | N | 0.069 | neutral | N | 0.358999719 | None | None | I |
V/M | 0.0973 | likely_benign | 0.0817 | benign | -0.38 | Destabilizing | 0.001 | N | 0.219 | neutral | None | None | None | None | I |
V/N | 0.1915 | likely_benign | 0.1513 | benign | -0.271 | Destabilizing | 0.044 | N | 0.511 | neutral | None | None | None | None | I |
V/P | 0.639 | likely_pathogenic | 0.5913 | pathogenic | -0.284 | Destabilizing | 0.085 | N | 0.485 | neutral | None | None | None | None | I |
V/Q | 0.2126 | likely_benign | 0.176 | benign | -0.496 | Destabilizing | 0.044 | N | 0.466 | neutral | None | None | None | None | I |
V/R | 0.1667 | likely_benign | 0.135 | benign | -0.008 | Destabilizing | 0.044 | N | 0.515 | neutral | None | None | None | None | I |
V/S | 0.1264 | likely_benign | 0.1025 | benign | -0.646 | Destabilizing | 0.009 | N | 0.379 | neutral | None | None | None | None | I |
V/T | 0.0765 | likely_benign | 0.0645 | benign | -0.638 | Destabilizing | None | N | 0.063 | neutral | None | None | None | None | I |
V/W | 0.6251 | likely_pathogenic | 0.5074 | ambiguous | -0.686 | Destabilizing | 0.788 | D | 0.373 | neutral | None | None | None | None | I |
V/Y | 0.405 | ambiguous | 0.3385 | benign | -0.396 | Destabilizing | 0.022 | N | 0.408 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.