Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17613 | 53062;53063;53064 | chr2:178607950;178607949;178607948 | chr2:179472677;179472676;179472675 |
N2AB | 15972 | 48139;48140;48141 | chr2:178607950;178607949;178607948 | chr2:179472677;179472676;179472675 |
N2A | 15045 | 45358;45359;45360 | chr2:178607950;178607949;178607948 | chr2:179472677;179472676;179472675 |
N2B | 8548 | 25867;25868;25869 | chr2:178607950;178607949;178607948 | chr2:179472677;179472676;179472675 |
Novex-1 | 8673 | 26242;26243;26244 | chr2:178607950;178607949;178607948 | chr2:179472677;179472676;179472675 |
Novex-2 | 8740 | 26443;26444;26445 | chr2:178607950;178607949;178607948 | chr2:179472677;179472676;179472675 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.885 | N | 0.313 | 0.328 | 0.303453137403 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/S | None | None | 0.17 | N | 0.3 | 0.088 | 0.0762999501168 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.105 | likely_benign | 0.0935 | benign | -0.357 | Destabilizing | 0.76 | D | 0.347 | neutral | N | 0.487088741 | None | None | N |
T/C | 0.4854 | ambiguous | 0.4178 | ambiguous | -0.259 | Destabilizing | 0.999 | D | 0.423 | neutral | None | None | None | None | N |
T/D | 0.3891 | ambiguous | 0.325 | benign | 0.13 | Stabilizing | 0.986 | D | 0.353 | neutral | None | None | None | None | N |
T/E | 0.2836 | likely_benign | 0.2371 | benign | 0.05 | Stabilizing | 0.986 | D | 0.339 | neutral | None | None | None | None | N |
T/F | 0.4137 | ambiguous | 0.3227 | benign | -0.851 | Destabilizing | 0.993 | D | 0.517 | neutral | None | None | None | None | N |
T/G | 0.2482 | likely_benign | 0.2194 | benign | -0.481 | Destabilizing | 0.91 | D | 0.389 | neutral | None | None | None | None | N |
T/H | 0.3526 | ambiguous | 0.3023 | benign | -0.787 | Destabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | N |
T/I | 0.2853 | likely_benign | 0.2087 | benign | -0.149 | Destabilizing | 0.885 | D | 0.313 | neutral | N | 0.468733941 | None | None | N |
T/K | 0.1954 | likely_benign | 0.1623 | benign | -0.383 | Destabilizing | 0.982 | D | 0.34 | neutral | N | 0.490225047 | None | None | N |
T/L | 0.1614 | likely_benign | 0.1326 | benign | -0.149 | Destabilizing | 0.91 | D | 0.312 | neutral | None | None | None | None | N |
T/M | 0.1252 | likely_benign | 0.1016 | benign | 0.034 | Stabilizing | 0.998 | D | 0.377 | neutral | None | None | None | None | N |
T/N | 0.1398 | likely_benign | 0.1198 | benign | -0.142 | Destabilizing | 0.986 | D | 0.328 | neutral | None | None | None | None | N |
T/P | 0.4485 | ambiguous | 0.3606 | ambiguous | -0.19 | Destabilizing | 0.991 | D | 0.365 | neutral | N | 0.467466493 | None | None | N |
T/Q | 0.2216 | likely_benign | 0.1934 | benign | -0.386 | Destabilizing | 0.993 | D | 0.351 | neutral | None | None | None | None | N |
T/R | 0.1966 | likely_benign | 0.1583 | benign | -0.1 | Destabilizing | 0.982 | D | 0.351 | neutral | N | 0.513389908 | None | None | N |
T/S | 0.1169 | likely_benign | 0.1103 | benign | -0.35 | Destabilizing | 0.17 | N | 0.3 | neutral | N | 0.44839428 | None | None | N |
T/V | 0.1961 | likely_benign | 0.1617 | benign | -0.19 | Destabilizing | 0.06 | N | 0.292 | neutral | None | None | None | None | N |
T/W | 0.6751 | likely_pathogenic | 0.5699 | pathogenic | -0.854 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
T/Y | 0.4197 | ambiguous | 0.3429 | ambiguous | -0.576 | Destabilizing | 0.998 | D | 0.513 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.