Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17628 | 53107;53108;53109 | chr2:178607905;178607904;178607903 | chr2:179472632;179472631;179472630 |
N2AB | 15987 | 48184;48185;48186 | chr2:178607905;178607904;178607903 | chr2:179472632;179472631;179472630 |
N2A | 15060 | 45403;45404;45405 | chr2:178607905;178607904;178607903 | chr2:179472632;179472631;179472630 |
N2B | 8563 | 25912;25913;25914 | chr2:178607905;178607904;178607903 | chr2:179472632;179472631;179472630 |
Novex-1 | 8688 | 26287;26288;26289 | chr2:178607905;178607904;178607903 | chr2:179472632;179472631;179472630 |
Novex-2 | 8755 | 26488;26489;26490 | chr2:178607905;178607904;178607903 | chr2:179472632;179472631;179472630 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs1326205439 | None | 0.007 | N | 0.315 | 0.104 | 0.110078149338 | gnomAD-4.0.0 | 1.59267E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86112E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1954 | likely_benign | 0.1856 | benign | -0.315 | Destabilizing | None | N | 0.201 | neutral | None | None | None | None | N |
Q/C | 0.5228 | ambiguous | 0.4382 | ambiguous | -0.089 | Destabilizing | 0.497 | N | 0.443 | neutral | None | None | None | None | N |
Q/D | 0.4405 | ambiguous | 0.3822 | ambiguous | 0.006 | Stabilizing | 0.009 | N | 0.265 | neutral | None | None | None | None | N |
Q/E | 0.0852 | likely_benign | 0.0798 | benign | 0.064 | Stabilizing | None | N | 0.135 | neutral | N | 0.397614035 | None | None | N |
Q/F | 0.6605 | likely_pathogenic | 0.5925 | pathogenic | -0.244 | Destabilizing | 0.497 | N | 0.548 | neutral | None | None | None | None | N |
Q/G | 0.2517 | likely_benign | 0.2222 | benign | -0.589 | Destabilizing | 0.004 | N | 0.351 | neutral | None | None | None | None | N |
Q/H | 0.191 | likely_benign | 0.1537 | benign | -0.244 | Destabilizing | 0.196 | N | 0.341 | neutral | N | 0.430958605 | None | None | N |
Q/I | 0.3714 | ambiguous | 0.3441 | ambiguous | 0.346 | Stabilizing | 0.044 | N | 0.49 | neutral | None | None | None | None | N |
Q/K | 0.0756 | likely_benign | 0.0697 | benign | -0.032 | Destabilizing | None | N | 0.136 | neutral | N | 0.377836196 | None | None | N |
Q/L | 0.1672 | likely_benign | 0.155 | benign | 0.346 | Stabilizing | 0.014 | N | 0.349 | neutral | N | 0.470823715 | None | None | N |
Q/M | 0.3427 | ambiguous | 0.3123 | benign | 0.3 | Stabilizing | 0.497 | N | 0.342 | neutral | None | None | None | None | N |
Q/N | 0.2522 | likely_benign | 0.2198 | benign | -0.612 | Destabilizing | 0.018 | N | 0.269 | neutral | None | None | None | None | N |
Q/P | 0.602 | likely_pathogenic | 0.6188 | pathogenic | 0.156 | Stabilizing | 0.028 | N | 0.34 | neutral | N | 0.476749609 | None | None | N |
Q/R | 0.0896 | likely_benign | 0.082 | benign | 0.111 | Stabilizing | 0.007 | N | 0.315 | neutral | N | 0.411543338 | None | None | N |
Q/S | 0.199 | likely_benign | 0.1896 | benign | -0.639 | Destabilizing | None | N | 0.155 | neutral | None | None | None | None | N |
Q/T | 0.1517 | likely_benign | 0.1352 | benign | -0.402 | Destabilizing | None | N | 0.209 | neutral | None | None | None | None | N |
Q/V | 0.2338 | likely_benign | 0.221 | benign | 0.156 | Stabilizing | 0.018 | N | 0.354 | neutral | None | None | None | None | N |
Q/W | 0.5604 | ambiguous | 0.458 | ambiguous | -0.201 | Destabilizing | 0.788 | D | 0.462 | neutral | None | None | None | None | N |
Q/Y | 0.4334 | ambiguous | 0.3708 | ambiguous | 0.062 | Stabilizing | 0.22 | N | 0.481 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.