Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17639 | 53140;53141;53142 | chr2:178607872;178607871;178607870 | chr2:179472599;179472598;179472597 |
N2AB | 15998 | 48217;48218;48219 | chr2:178607872;178607871;178607870 | chr2:179472599;179472598;179472597 |
N2A | 15071 | 45436;45437;45438 | chr2:178607872;178607871;178607870 | chr2:179472599;179472598;179472597 |
N2B | 8574 | 25945;25946;25947 | chr2:178607872;178607871;178607870 | chr2:179472599;179472598;179472597 |
Novex-1 | 8699 | 26320;26321;26322 | chr2:178607872;178607871;178607870 | chr2:179472599;179472598;179472597 |
Novex-2 | 8766 | 26521;26522;26523 | chr2:178607872;178607871;178607870 | chr2:179472599;179472598;179472597 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.989 | N | 0.553 | 0.329 | 0.292787519742 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.94099E-04 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2087 | likely_benign | 0.2137 | benign | -0.395 | Destabilizing | 0.978 | D | 0.579 | neutral | N | 0.462049516 | None | None | N |
D/C | 0.7134 | likely_pathogenic | 0.7399 | pathogenic | -0.121 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
D/E | 0.2456 | likely_benign | 0.2536 | benign | -0.565 | Destabilizing | 0.948 | D | 0.447 | neutral | N | 0.408791034 | None | None | N |
D/F | 0.6785 | likely_pathogenic | 0.6554 | pathogenic | 0.192 | Stabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
D/G | 0.3368 | likely_benign | 0.3454 | ambiguous | -0.795 | Destabilizing | 0.989 | D | 0.532 | neutral | N | 0.477923045 | None | None | N |
D/H | 0.3553 | ambiguous | 0.3561 | ambiguous | -0.117 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.473686189 | None | None | N |
D/I | 0.3939 | ambiguous | 0.4021 | ambiguous | 0.672 | Stabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
D/K | 0.4283 | ambiguous | 0.4535 | ambiguous | -0.203 | Destabilizing | 0.246 | N | 0.287 | neutral | None | None | None | None | N |
D/L | 0.43 | ambiguous | 0.4454 | ambiguous | 0.672 | Stabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | N |
D/M | 0.675 | likely_pathogenic | 0.6824 | pathogenic | 1.07 | Stabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
D/N | 0.1191 | likely_benign | 0.1204 | benign | -0.796 | Destabilizing | 0.989 | D | 0.553 | neutral | N | 0.468551414 | None | None | N |
D/P | 0.7686 | likely_pathogenic | 0.7884 | pathogenic | 0.343 | Stabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
D/Q | 0.3762 | ambiguous | 0.4018 | ambiguous | -0.596 | Destabilizing | 0.995 | D | 0.599 | neutral | None | None | None | None | N |
D/R | 0.4656 | ambiguous | 0.4837 | ambiguous | -0.052 | Destabilizing | 0.99 | D | 0.635 | neutral | None | None | None | None | N |
D/S | 0.166 | likely_benign | 0.1746 | benign | -1.077 | Destabilizing | 0.983 | D | 0.482 | neutral | None | None | None | None | N |
D/T | 0.2761 | likely_benign | 0.3007 | benign | -0.734 | Destabilizing | 0.992 | D | 0.599 | neutral | None | None | None | None | N |
D/V | 0.2342 | likely_benign | 0.2422 | benign | 0.343 | Stabilizing | 0.997 | D | 0.737 | prob.delet. | N | 0.475402815 | None | None | N |
D/W | 0.9191 | likely_pathogenic | 0.9142 | pathogenic | 0.389 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
D/Y | 0.2896 | likely_benign | 0.2739 | benign | 0.463 | Stabilizing | 0.999 | D | 0.757 | deleterious | N | 0.489660192 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.