Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17641 | 53146;53147;53148 | chr2:178607866;178607865;178607864 | chr2:179472593;179472592;179472591 |
N2AB | 16000 | 48223;48224;48225 | chr2:178607866;178607865;178607864 | chr2:179472593;179472592;179472591 |
N2A | 15073 | 45442;45443;45444 | chr2:178607866;178607865;178607864 | chr2:179472593;179472592;179472591 |
N2B | 8576 | 25951;25952;25953 | chr2:178607866;178607865;178607864 | chr2:179472593;179472592;179472591 |
Novex-1 | 8701 | 26326;26327;26328 | chr2:178607866;178607865;178607864 | chr2:179472593;179472592;179472591 |
Novex-2 | 8768 | 26527;26528;26529 | chr2:178607866;178607865;178607864 | chr2:179472593;179472592;179472591 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1454839951 | None | 0.101 | N | 0.523 | 0.186 | 0.180583059064 | gnomAD-4.0.0 | 1.59271E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8611E-06 | 0 | 0 |
K/R | rs747537364 | -1.288 | 0.001 | N | 0.235 | 0.087 | 0.221734844693 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 8.89E-06 | 0 |
K/R | rs747537364 | -1.288 | 0.001 | N | 0.235 | 0.087 | 0.221734844693 | gnomAD-4.0.0 | 4.77817E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.7223E-06 | 0 | 3.02773E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5688 | likely_pathogenic | 0.5642 | pathogenic | -1.412 | Destabilizing | 0.228 | N | 0.52 | neutral | None | None | None | None | N |
K/C | 0.6049 | likely_pathogenic | 0.5803 | pathogenic | -1.457 | Destabilizing | 0.983 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/D | 0.8838 | likely_pathogenic | 0.8756 | pathogenic | -1.898 | Destabilizing | 0.418 | N | 0.579 | neutral | None | None | None | None | N |
K/E | 0.3692 | ambiguous | 0.3703 | ambiguous | -1.617 | Destabilizing | 0.101 | N | 0.523 | neutral | N | 0.360845159 | None | None | N |
K/F | 0.7046 | likely_pathogenic | 0.6635 | pathogenic | -0.557 | Destabilizing | 0.716 | D | 0.664 | neutral | None | None | None | None | N |
K/G | 0.7739 | likely_pathogenic | 0.7491 | pathogenic | -1.878 | Destabilizing | 0.418 | N | 0.59 | neutral | None | None | None | None | N |
K/H | 0.3057 | likely_benign | 0.2897 | benign | -2.009 | Highly Destabilizing | 0.836 | D | 0.607 | neutral | None | None | None | None | N |
K/I | 0.2295 | likely_benign | 0.2483 | benign | -0.096 | Destabilizing | 0.007 | N | 0.629 | neutral | N | 0.422243121 | None | None | N |
K/L | 0.2636 | likely_benign | 0.2795 | benign | -0.096 | Destabilizing | 0.002 | N | 0.565 | neutral | None | None | None | None | N |
K/M | 0.2043 | likely_benign | 0.2092 | benign | -0.476 | Destabilizing | 0.716 | D | 0.601 | neutral | None | None | None | None | N |
K/N | 0.6178 | likely_pathogenic | 0.5989 | pathogenic | -1.84 | Destabilizing | 0.351 | N | 0.533 | neutral | N | 0.416373154 | None | None | N |
K/P | 0.9861 | likely_pathogenic | 0.9835 | pathogenic | -0.514 | Destabilizing | 0.94 | D | 0.611 | neutral | None | None | None | None | N |
K/Q | 0.1694 | likely_benign | 0.1651 | benign | -1.466 | Destabilizing | 0.021 | N | 0.427 | neutral | N | 0.390592062 | None | None | N |
K/R | 0.083 | likely_benign | 0.0791 | benign | -1.327 | Destabilizing | 0.001 | N | 0.235 | neutral | N | 0.421376329 | None | None | N |
K/S | 0.6162 | likely_pathogenic | 0.5938 | pathogenic | -2.303 | Highly Destabilizing | 0.418 | N | 0.537 | neutral | None | None | None | None | N |
K/T | 0.2497 | likely_benign | 0.248 | benign | -1.784 | Destabilizing | 0.351 | N | 0.565 | neutral | N | 0.418661311 | None | None | N |
K/V | 0.2504 | likely_benign | 0.2672 | benign | -0.514 | Destabilizing | 0.129 | N | 0.58 | neutral | None | None | None | None | N |
K/W | 0.7276 | likely_pathogenic | 0.6742 | pathogenic | -0.707 | Destabilizing | 0.983 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/Y | 0.5628 | ambiguous | 0.5295 | ambiguous | -0.355 | Destabilizing | 0.94 | D | 0.653 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.