Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17649 | 53170;53171;53172 | chr2:178607842;178607841;178607840 | chr2:179472569;179472568;179472567 |
N2AB | 16008 | 48247;48248;48249 | chr2:178607842;178607841;178607840 | chr2:179472569;179472568;179472567 |
N2A | 15081 | 45466;45467;45468 | chr2:178607842;178607841;178607840 | chr2:179472569;179472568;179472567 |
N2B | 8584 | 25975;25976;25977 | chr2:178607842;178607841;178607840 | chr2:179472569;179472568;179472567 |
Novex-1 | 8709 | 26350;26351;26352 | chr2:178607842;178607841;178607840 | chr2:179472569;179472568;179472567 |
Novex-2 | 8776 | 26551;26552;26553 | chr2:178607842;178607841;178607840 | chr2:179472569;179472568;179472567 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | rs2055287229 | None | 0.741 | N | 0.368 | 0.161 | 0.225902525712 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3402 | ambiguous | 0.3483 | ambiguous | -0.816 | Destabilizing | 0.003 | N | 0.322 | neutral | None | None | None | None | I |
A/D | 0.1911 | likely_benign | 0.1576 | benign | -0.514 | Destabilizing | 0.484 | N | 0.517 | neutral | N | 0.465628539 | None | None | I |
A/E | 0.1679 | likely_benign | 0.1588 | benign | -0.673 | Destabilizing | 0.555 | D | 0.382 | neutral | None | None | None | None | I |
A/F | 0.2246 | likely_benign | 0.2112 | benign | -0.912 | Destabilizing | 0.235 | N | 0.517 | neutral | None | None | None | None | I |
A/G | 0.115 | likely_benign | 0.1167 | benign | -0.233 | Destabilizing | 0.211 | N | 0.299 | neutral | N | 0.509509815 | None | None | I |
A/H | 0.3392 | likely_benign | 0.3146 | benign | -0.223 | Destabilizing | 0.935 | D | 0.497 | neutral | None | None | None | None | I |
A/I | 0.1328 | likely_benign | 0.1259 | benign | -0.388 | Destabilizing | 0.001 | N | 0.297 | neutral | None | None | None | None | I |
A/K | 0.2678 | likely_benign | 0.2625 | benign | -0.529 | Destabilizing | 0.555 | D | 0.371 | neutral | None | None | None | None | I |
A/L | 0.1059 | likely_benign | 0.1059 | benign | -0.388 | Destabilizing | 0.001 | N | 0.255 | neutral | None | None | None | None | I |
A/M | 0.1479 | likely_benign | 0.1392 | benign | -0.447 | Destabilizing | 0.235 | N | 0.358 | neutral | None | None | None | None | I |
A/N | 0.1878 | likely_benign | 0.1593 | benign | -0.255 | Destabilizing | 0.791 | D | 0.509 | neutral | None | None | None | None | I |
A/P | 0.2292 | likely_benign | 0.2315 | benign | -0.304 | Destabilizing | 0.741 | D | 0.368 | neutral | N | 0.495298085 | None | None | I |
A/Q | 0.2302 | likely_benign | 0.2283 | benign | -0.543 | Destabilizing | 0.791 | D | 0.362 | neutral | None | None | None | None | I |
A/R | 0.2505 | likely_benign | 0.2499 | benign | -0.062 | Destabilizing | 0.555 | D | 0.362 | neutral | None | None | None | None | I |
A/S | 0.0941 | likely_benign | 0.0877 | benign | -0.436 | Destabilizing | 0.117 | N | 0.321 | neutral | N | 0.46293495 | None | None | I |
A/T | 0.0837 | likely_benign | 0.0791 | benign | -0.521 | Destabilizing | 0.062 | N | 0.29 | neutral | N | 0.513323698 | None | None | I |
A/V | 0.0819 | likely_benign | 0.0833 | benign | -0.304 | Destabilizing | None | N | 0.102 | neutral | N | 0.498471676 | None | None | I |
A/W | 0.5688 | likely_pathogenic | 0.5559 | ambiguous | -1.014 | Destabilizing | 0.935 | D | 0.611 | neutral | None | None | None | None | I |
A/Y | 0.353 | ambiguous | 0.3117 | benign | -0.683 | Destabilizing | 0.555 | D | 0.509 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.