Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17658 | 53197;53198;53199 | chr2:178607815;178607814;178607813 | chr2:179472542;179472541;179472540 |
N2AB | 16017 | 48274;48275;48276 | chr2:178607815;178607814;178607813 | chr2:179472542;179472541;179472540 |
N2A | 15090 | 45493;45494;45495 | chr2:178607815;178607814;178607813 | chr2:179472542;179472541;179472540 |
N2B | 8593 | 26002;26003;26004 | chr2:178607815;178607814;178607813 | chr2:179472542;179472541;179472540 |
Novex-1 | 8718 | 26377;26378;26379 | chr2:178607815;178607814;178607813 | chr2:179472542;179472541;179472540 |
Novex-2 | 8785 | 26578;26579;26580 | chr2:178607815;178607814;178607813 | chr2:179472542;179472541;179472540 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | rs1576367047 | None | 0.999 | N | 0.853 | 0.37 | 0.36893422563 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/K | rs1576367047 | None | 0.999 | N | 0.853 | 0.37 | 0.36893422563 | gnomAD-4.0.0 | 6.57955E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4721E-05 | 0 | 0 |
T/S | None | None | 0.997 | N | 0.754 | 0.202 | 0.144782658237 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.371 | ambiguous | 0.317 | benign | -0.935 | Destabilizing | 0.997 | D | 0.737 | deleterious | N | 0.481624206 | None | None | N |
T/C | 0.7476 | likely_pathogenic | 0.7149 | pathogenic | -0.693 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
T/D | 0.9232 | likely_pathogenic | 0.9208 | pathogenic | -0.784 | Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | N |
T/E | 0.9272 | likely_pathogenic | 0.9309 | pathogenic | -0.664 | Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
T/F | 0.8744 | likely_pathogenic | 0.8395 | pathogenic | -0.542 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
T/G | 0.6187 | likely_pathogenic | 0.5994 | pathogenic | -1.314 | Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
T/H | 0.9364 | likely_pathogenic | 0.9314 | pathogenic | -1.481 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
T/I | 0.6122 | likely_pathogenic | 0.5601 | ambiguous | 0.028 | Stabilizing | 0.999 | D | 0.839 | deleterious | N | 0.468425623 | None | None | N |
T/K | 0.9335 | likely_pathogenic | 0.9295 | pathogenic | -0.823 | Destabilizing | 0.999 | D | 0.853 | deleterious | N | 0.460896354 | None | None | N |
T/L | 0.3639 | ambiguous | 0.3318 | benign | 0.028 | Stabilizing | 0.998 | D | 0.829 | deleterious | None | None | None | None | N |
T/M | 0.2728 | likely_benign | 0.234 | benign | 0.051 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
T/N | 0.6547 | likely_pathogenic | 0.6466 | pathogenic | -1.115 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
T/P | 0.7451 | likely_pathogenic | 0.7646 | pathogenic | -0.259 | Destabilizing | 0.999 | D | 0.818 | deleterious | N | 0.454802965 | None | None | N |
T/Q | 0.9036 | likely_pathogenic | 0.8994 | pathogenic | -1.029 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
T/R | 0.9242 | likely_pathogenic | 0.9169 | pathogenic | -0.845 | Destabilizing | 0.999 | D | 0.824 | deleterious | N | 0.479254099 | None | None | N |
T/S | 0.3867 | ambiguous | 0.3567 | ambiguous | -1.376 | Destabilizing | 0.997 | D | 0.754 | deleterious | N | 0.478661259 | None | None | N |
T/V | 0.4416 | ambiguous | 0.4049 | ambiguous | -0.259 | Destabilizing | 0.998 | D | 0.816 | deleterious | None | None | None | None | N |
T/W | 0.975 | likely_pathogenic | 0.9691 | pathogenic | -0.592 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
T/Y | 0.9251 | likely_pathogenic | 0.9125 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.