Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17661 | 53206;53207;53208 | chr2:178607806;178607805;178607804 | chr2:179472533;179472532;179472531 |
N2AB | 16020 | 48283;48284;48285 | chr2:178607806;178607805;178607804 | chr2:179472533;179472532;179472531 |
N2A | 15093 | 45502;45503;45504 | chr2:178607806;178607805;178607804 | chr2:179472533;179472532;179472531 |
N2B | 8596 | 26011;26012;26013 | chr2:178607806;178607805;178607804 | chr2:179472533;179472532;179472531 |
Novex-1 | 8721 | 26386;26387;26388 | chr2:178607806;178607805;178607804 | chr2:179472533;179472532;179472531 |
Novex-2 | 8788 | 26587;26588;26589 | chr2:178607806;178607805;178607804 | chr2:179472533;179472532;179472531 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.981 | N | 0.857 | 0.244 | 0.626665467207 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3363 | likely_benign | 0.2432 | benign | -1.758 | Destabilizing | 0.022 | N | 0.329 | neutral | N | 0.457364409 | None | None | N |
V/C | 0.7521 | likely_pathogenic | 0.7083 | pathogenic | -1.315 | Destabilizing | 0.999 | D | 0.67 | prob.neutral | None | None | None | None | N |
V/D | 0.7704 | likely_pathogenic | 0.6886 | pathogenic | -1.65 | Destabilizing | 0.981 | D | 0.857 | deleterious | N | 0.478510538 | None | None | N |
V/E | 0.54 | ambiguous | 0.4605 | ambiguous | -1.551 | Destabilizing | 0.971 | D | 0.785 | deleterious | None | None | None | None | N |
V/F | 0.2577 | likely_benign | 0.2257 | benign | -1.132 | Destabilizing | 0.961 | D | 0.676 | prob.neutral | N | 0.475215174 | None | None | N |
V/G | 0.5009 | ambiguous | 0.4205 | ambiguous | -2.197 | Highly Destabilizing | 0.926 | D | 0.806 | deleterious | N | 0.466393764 | None | None | N |
V/H | 0.7683 | likely_pathogenic | 0.7169 | pathogenic | -1.747 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
V/I | 0.0797 | likely_benign | 0.0776 | benign | -0.606 | Destabilizing | 0.022 | N | 0.269 | neutral | N | 0.500788757 | None | None | N |
V/K | 0.5274 | ambiguous | 0.4674 | ambiguous | -1.542 | Destabilizing | 0.971 | D | 0.78 | deleterious | None | None | None | None | N |
V/L | 0.2564 | likely_benign | 0.235 | benign | -0.606 | Destabilizing | 0.595 | D | 0.39 | neutral | N | 0.500788757 | None | None | N |
V/M | 0.1816 | likely_benign | 0.1661 | benign | -0.524 | Destabilizing | 0.971 | D | 0.546 | neutral | None | None | None | None | N |
V/N | 0.6208 | likely_pathogenic | 0.5511 | ambiguous | -1.51 | Destabilizing | 0.985 | D | 0.861 | deleterious | None | None | None | None | N |
V/P | 0.9577 | likely_pathogenic | 0.9317 | pathogenic | -0.956 | Destabilizing | 0.985 | D | 0.803 | deleterious | None | None | None | None | N |
V/Q | 0.4982 | ambiguous | 0.4508 | ambiguous | -1.522 | Destabilizing | 0.985 | D | 0.811 | deleterious | None | None | None | None | N |
V/R | 0.472 | ambiguous | 0.4224 | ambiguous | -1.163 | Destabilizing | 0.985 | D | 0.858 | deleterious | None | None | None | None | N |
V/S | 0.4898 | ambiguous | 0.406 | ambiguous | -2.141 | Highly Destabilizing | 0.943 | D | 0.758 | deleterious | None | None | None | None | N |
V/T | 0.2949 | likely_benign | 0.2565 | benign | -1.904 | Destabilizing | 0.904 | D | 0.563 | neutral | None | None | None | None | N |
V/W | 0.895 | likely_pathogenic | 0.8749 | pathogenic | -1.437 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
V/Y | 0.6964 | likely_pathogenic | 0.6367 | pathogenic | -1.112 | Destabilizing | 0.995 | D | 0.663 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.