Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17678 | 53257;53258;53259 | chr2:178607656;178607655;178607654 | chr2:179472383;179472382;179472381 |
N2AB | 16037 | 48334;48335;48336 | chr2:178607656;178607655;178607654 | chr2:179472383;179472382;179472381 |
N2A | 15110 | 45553;45554;45555 | chr2:178607656;178607655;178607654 | chr2:179472383;179472382;179472381 |
N2B | 8613 | 26062;26063;26064 | chr2:178607656;178607655;178607654 | chr2:179472383;179472382;179472381 |
Novex-1 | 8738 | 26437;26438;26439 | chr2:178607656;178607655;178607654 | chr2:179472383;179472382;179472381 |
Novex-2 | 8805 | 26638;26639;26640 | chr2:178607656;178607655;178607654 | chr2:179472383;179472382;179472381 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs1423968417 | None | 1.0 | N | 0.747 | 0.333 | 0.815354353143 | gnomAD-4.0.0 | 1.59292E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.7804E-05 | None | 0 | 0 | 0 | 0 | 0 |
V/L | None | None | 0.997 | N | 0.539 | 0.335 | 0.452640719197 | gnomAD-4.0.0 | 1.59292E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.861E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5702 | likely_pathogenic | 0.5686 | pathogenic | -0.661 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.504520575 | None | None | I |
V/C | 0.8724 | likely_pathogenic | 0.8734 | pathogenic | -0.789 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
V/D | 0.9414 | likely_pathogenic | 0.9462 | pathogenic | -0.124 | Destabilizing | 1.0 | D | 0.774 | deleterious | D | 0.524589203 | None | None | I |
V/E | 0.8703 | likely_pathogenic | 0.8733 | pathogenic | -0.196 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
V/F | 0.4963 | ambiguous | 0.4959 | ambiguous | -0.68 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.465330255 | None | None | I |
V/G | 0.6745 | likely_pathogenic | 0.6867 | pathogenic | -0.846 | Destabilizing | 1.0 | D | 0.743 | deleterious | D | 0.524589203 | None | None | I |
V/H | 0.9651 | likely_pathogenic | 0.9649 | pathogenic | -0.425 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
V/I | 0.1204 | likely_benign | 0.1179 | benign | -0.307 | Destabilizing | 0.997 | D | 0.506 | neutral | N | 0.423539561 | None | None | I |
V/K | 0.9239 | likely_pathogenic | 0.9269 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
V/L | 0.405 | ambiguous | 0.4138 | ambiguous | -0.307 | Destabilizing | 0.997 | D | 0.539 | neutral | N | 0.43931709 | None | None | I |
V/M | 0.331 | likely_benign | 0.3272 | benign | -0.476 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
V/N | 0.8694 | likely_pathogenic | 0.8811 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
V/P | 0.9735 | likely_pathogenic | 0.9753 | pathogenic | -0.389 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
V/Q | 0.8292 | likely_pathogenic | 0.8346 | pathogenic | -0.532 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
V/R | 0.8821 | likely_pathogenic | 0.8926 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
V/S | 0.7302 | likely_pathogenic | 0.7431 | pathogenic | -0.808 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
V/T | 0.615 | likely_pathogenic | 0.6196 | pathogenic | -0.766 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | I |
V/W | 0.973 | likely_pathogenic | 0.9733 | pathogenic | -0.785 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
V/Y | 0.9184 | likely_pathogenic | 0.9194 | pathogenic | -0.487 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.