Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17684 | 53275;53276;53277 | chr2:178607638;178607637;178607636 | chr2:179472365;179472364;179472363 |
N2AB | 16043 | 48352;48353;48354 | chr2:178607638;178607637;178607636 | chr2:179472365;179472364;179472363 |
N2A | 15116 | 45571;45572;45573 | chr2:178607638;178607637;178607636 | chr2:179472365;179472364;179472363 |
N2B | 8619 | 26080;26081;26082 | chr2:178607638;178607637;178607636 | chr2:179472365;179472364;179472363 |
Novex-1 | 8744 | 26455;26456;26457 | chr2:178607638;178607637;178607636 | chr2:179472365;179472364;179472363 |
Novex-2 | 8811 | 26656;26657;26658 | chr2:178607638;178607637;178607636 | chr2:179472365;179472364;179472363 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1456939827 | None | 0.011 | N | 0.179 | 0.099 | 0.602985972322 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 3.88954E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs1456939827 | None | 0.011 | N | 0.179 | 0.099 | 0.602985972322 | gnomAD-4.0.0 | 8.05967E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.90438E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8786 | likely_pathogenic | 0.8471 | pathogenic | -2.115 | Highly Destabilizing | 0.702 | D | 0.528 | neutral | None | None | None | None | N |
I/C | 0.8861 | likely_pathogenic | 0.8462 | pathogenic | -1.287 | Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
I/D | 0.9876 | likely_pathogenic | 0.9882 | pathogenic | -1.873 | Destabilizing | 0.988 | D | 0.655 | neutral | None | None | None | None | N |
I/E | 0.9586 | likely_pathogenic | 0.9616 | pathogenic | -1.761 | Destabilizing | 0.988 | D | 0.645 | neutral | None | None | None | None | N |
I/F | 0.4563 | ambiguous | 0.4504 | ambiguous | -1.301 | Destabilizing | 0.988 | D | 0.589 | neutral | None | None | None | None | N |
I/G | 0.9665 | likely_pathogenic | 0.9612 | pathogenic | -2.556 | Highly Destabilizing | 0.988 | D | 0.643 | neutral | None | None | None | None | N |
I/H | 0.9589 | likely_pathogenic | 0.9578 | pathogenic | -1.873 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
I/K | 0.9223 | likely_pathogenic | 0.9311 | pathogenic | -1.606 | Destabilizing | 0.984 | D | 0.645 | neutral | N | 0.491977115 | None | None | N |
I/L | 0.2174 | likely_benign | 0.2152 | benign | -0.907 | Destabilizing | 0.437 | N | 0.41 | neutral | N | 0.478224982 | None | None | N |
I/M | 0.2243 | likely_benign | 0.2097 | benign | -0.708 | Destabilizing | 0.984 | D | 0.551 | neutral | N | 0.491470136 | None | None | N |
I/N | 0.892 | likely_pathogenic | 0.8894 | pathogenic | -1.612 | Destabilizing | 0.988 | D | 0.66 | neutral | None | None | None | None | N |
I/P | 0.9932 | likely_pathogenic | 0.9938 | pathogenic | -1.283 | Destabilizing | 0.996 | D | 0.66 | neutral | None | None | None | None | N |
I/Q | 0.9314 | likely_pathogenic | 0.9293 | pathogenic | -1.645 | Destabilizing | 0.996 | D | 0.671 | neutral | None | None | None | None | N |
I/R | 0.902 | likely_pathogenic | 0.9092 | pathogenic | -1.127 | Destabilizing | 0.984 | D | 0.66 | neutral | N | 0.486127765 | None | None | N |
I/S | 0.9147 | likely_pathogenic | 0.8992 | pathogenic | -2.286 | Highly Destabilizing | 0.851 | D | 0.569 | neutral | None | None | None | None | N |
I/T | 0.805 | likely_pathogenic | 0.7605 | pathogenic | -2.049 | Highly Destabilizing | 0.103 | N | 0.387 | neutral | D | 0.52882716 | None | None | N |
I/V | 0.1153 | likely_benign | 0.0987 | benign | -1.283 | Destabilizing | 0.011 | N | 0.179 | neutral | N | 0.390427065 | None | None | N |
I/W | 0.9654 | likely_pathogenic | 0.9669 | pathogenic | -1.555 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
I/Y | 0.8701 | likely_pathogenic | 0.8754 | pathogenic | -1.289 | Destabilizing | 0.996 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.