Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17685 | 53278;53279;53280 | chr2:178607635;178607634;178607633 | chr2:179472362;179472361;179472360 |
N2AB | 16044 | 48355;48356;48357 | chr2:178607635;178607634;178607633 | chr2:179472362;179472361;179472360 |
N2A | 15117 | 45574;45575;45576 | chr2:178607635;178607634;178607633 | chr2:179472362;179472361;179472360 |
N2B | 8620 | 26083;26084;26085 | chr2:178607635;178607634;178607633 | chr2:179472362;179472361;179472360 |
Novex-1 | 8745 | 26458;26459;26460 | chr2:178607635;178607634;178607633 | chr2:179472362;179472361;179472360 |
Novex-2 | 8812 | 26659;26660;26661 | chr2:178607635;178607634;178607633 | chr2:179472362;179472361;179472360 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs200387466 | 0.171 | 0.017 | N | 0.209 | 0.177 | 0.493156425868 | gnomAD-2.1.1 | 2.04339E-04 | None | None | None | None | I | None | 2.27668E-03 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.40726E-04 |
M/I | rs200387466 | 0.171 | 0.017 | N | 0.209 | 0.177 | 0.493156425868 | gnomAD-3.1.2 | 6.71088E-04 | None | None | None | None | I | None | 2.38992E-03 | 1.96747E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/I | rs200387466 | 0.171 | 0.017 | N | 0.209 | 0.177 | 0.493156425868 | 1000 genomes | 7.98722E-04 | None | None | None | None | I | None | 3E-03 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
M/I | rs200387466 | 0.171 | 0.017 | N | 0.209 | 0.177 | 0.493156425868 | gnomAD-4.0.0 | 1.27707E-04 | None | None | None | None | I | None | 2.49413E-03 | 8.33667E-05 | None | 0 | 0 | None | 0 | 0 | 3.3916E-06 | 0 | 1.60159E-04 |
M/K | None | None | 0.101 | N | 0.405 | 0.236 | 0.552205712323 | gnomAD-4.0.0 | 3.18548E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72181E-06 | 0 | 0 |
M/T | rs1289030052 | None | 0.003 | N | 0.231 | 0.189 | 0.723229803861 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
M/T | rs1289030052 | None | 0.003 | N | 0.231 | 0.189 | 0.723229803861 | gnomAD-4.0.0 | 6.41157E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.19764E-05 | 0 | 0 |
M/V | rs2055217957 | None | 0.001 | N | 0.183 | 0.085 | 0.39619538035 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
M/V | rs2055217957 | None | 0.001 | N | 0.183 | 0.085 | 0.39619538035 | gnomAD-4.0.0 | 6.81979E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.64636E-04 | 8.47902E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.392 | ambiguous | 0.3602 | ambiguous | -0.54 | Destabilizing | 0.061 | N | 0.297 | neutral | None | None | None | None | I |
M/C | 0.7011 | likely_pathogenic | 0.6841 | pathogenic | -0.702 | Destabilizing | 0.836 | D | 0.409 | neutral | None | None | None | None | I |
M/D | 0.8881 | likely_pathogenic | 0.8959 | pathogenic | 0.377 | Stabilizing | 0.593 | D | 0.483 | neutral | None | None | None | None | I |
M/E | 0.5201 | ambiguous | 0.5407 | ambiguous | 0.355 | Stabilizing | 0.228 | N | 0.43 | neutral | None | None | None | None | I |
M/F | 0.3783 | ambiguous | 0.3715 | ambiguous | 0.035 | Stabilizing | 0.418 | N | 0.29 | neutral | None | None | None | None | I |
M/G | 0.7458 | likely_pathogenic | 0.7328 | pathogenic | -0.753 | Destabilizing | 0.375 | N | 0.443 | neutral | None | None | None | None | I |
M/H | 0.482 | ambiguous | 0.4793 | ambiguous | 0.176 | Stabilizing | 0.94 | D | 0.446 | neutral | None | None | None | None | I |
M/I | 0.3726 | ambiguous | 0.3805 | ambiguous | -0.058 | Destabilizing | 0.017 | N | 0.209 | neutral | N | 0.437415722 | None | None | I |
M/K | 0.1764 | likely_benign | 0.1843 | benign | 0.276 | Stabilizing | 0.101 | N | 0.405 | neutral | N | 0.343388053 | None | None | I |
M/L | 0.1194 | likely_benign | 0.1012 | benign | -0.058 | Destabilizing | None | N | 0.173 | neutral | N | 0.41255735 | None | None | I |
M/N | 0.5806 | likely_pathogenic | 0.578 | pathogenic | 0.313 | Stabilizing | 0.593 | D | 0.455 | neutral | None | None | None | None | I |
M/P | 0.574 | likely_pathogenic | 0.5783 | pathogenic | -0.189 | Destabilizing | 0.816 | D | 0.492 | neutral | None | None | None | None | I |
M/Q | 0.2302 | likely_benign | 0.2308 | benign | 0.211 | Stabilizing | 0.418 | N | 0.285 | neutral | None | None | None | None | I |
M/R | 0.1854 | likely_benign | 0.2051 | benign | 0.754 | Stabilizing | 0.001 | N | 0.23 | neutral | N | 0.349468664 | None | None | I |
M/S | 0.5186 | ambiguous | 0.5118 | ambiguous | -0.196 | Destabilizing | 0.129 | N | 0.411 | neutral | None | None | None | None | I |
M/T | 0.2375 | likely_benign | 0.2527 | benign | -0.108 | Destabilizing | 0.003 | N | 0.231 | neutral | N | 0.424697141 | None | None | I |
M/V | 0.1007 | likely_benign | 0.1049 | benign | -0.189 | Destabilizing | 0.001 | N | 0.183 | neutral | N | 0.404284583 | None | None | I |
M/W | 0.6756 | likely_pathogenic | 0.6838 | pathogenic | 0.038 | Stabilizing | 0.983 | D | 0.404 | neutral | None | None | None | None | I |
M/Y | 0.5928 | likely_pathogenic | 0.5855 | pathogenic | 0.162 | Stabilizing | 0.593 | D | 0.435 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.