Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17700 | 53323;53324;53325 | chr2:178607590;178607589;178607588 | chr2:179472317;179472316;179472315 |
N2AB | 16059 | 48400;48401;48402 | chr2:178607590;178607589;178607588 | chr2:179472317;179472316;179472315 |
N2A | 15132 | 45619;45620;45621 | chr2:178607590;178607589;178607588 | chr2:179472317;179472316;179472315 |
N2B | 8635 | 26128;26129;26130 | chr2:178607590;178607589;178607588 | chr2:179472317;179472316;179472315 |
Novex-1 | 8760 | 26503;26504;26505 | chr2:178607590;178607589;178607588 | chr2:179472317;179472316;179472315 |
Novex-2 | 8827 | 26704;26705;26706 | chr2:178607590;178607589;178607588 | chr2:179472317;179472316;179472315 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs767647740 | 0.055 | 1.0 | D | 0.739 | 0.624 | 0.719680077433 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
P/L | rs767647740 | 0.055 | 1.0 | D | 0.739 | 0.624 | 0.719680077433 | gnomAD-4.0.0 | 1.59242E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9502 | likely_pathogenic | 0.9625 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.576926799 | None | None | I |
P/C | 0.995 | likely_pathogenic | 0.9968 | pathogenic | -0.511 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
P/D | 0.987 | likely_pathogenic | 0.9877 | pathogenic | -0.429 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
P/E | 0.9832 | likely_pathogenic | 0.9868 | pathogenic | -0.556 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
P/F | 0.9972 | likely_pathogenic | 0.9982 | pathogenic | -0.783 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
P/G | 0.9777 | likely_pathogenic | 0.9839 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
P/H | 0.9816 | likely_pathogenic | 0.9867 | pathogenic | -0.229 | Destabilizing | 1.0 | D | 0.753 | deleterious | D | 0.64265633 | None | None | I |
P/I | 0.9832 | likely_pathogenic | 0.9859 | pathogenic | -0.314 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
P/K | 0.9841 | likely_pathogenic | 0.9878 | pathogenic | -0.445 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
P/L | 0.9518 | likely_pathogenic | 0.9612 | pathogenic | -0.314 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.617118218 | None | None | I |
P/M | 0.987 | likely_pathogenic | 0.9906 | pathogenic | -0.307 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | I |
P/N | 0.986 | likely_pathogenic | 0.9888 | pathogenic | -0.106 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
P/Q | 0.9776 | likely_pathogenic | 0.9849 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
P/R | 0.9673 | likely_pathogenic | 0.9756 | pathogenic | 0.099 | Stabilizing | 1.0 | D | 0.753 | deleterious | D | 0.61671461 | None | None | I |
P/S | 0.9824 | likely_pathogenic | 0.9863 | pathogenic | -0.424 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | D | 0.57641982 | None | None | I |
P/T | 0.9547 | likely_pathogenic | 0.9642 | pathogenic | -0.457 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | D | 0.642252722 | None | None | I |
P/V | 0.9687 | likely_pathogenic | 0.9733 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
P/W | 0.9981 | likely_pathogenic | 0.9987 | pathogenic | -0.86 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
P/Y | 0.9951 | likely_pathogenic | 0.9968 | pathogenic | -0.562 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.