Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17702 | 53329;53330;53331 | chr2:178607584;178607583;178607582 | chr2:179472311;179472310;179472309 |
N2AB | 16061 | 48406;48407;48408 | chr2:178607584;178607583;178607582 | chr2:179472311;179472310;179472309 |
N2A | 15134 | 45625;45626;45627 | chr2:178607584;178607583;178607582 | chr2:179472311;179472310;179472309 |
N2B | 8637 | 26134;26135;26136 | chr2:178607584;178607583;178607582 | chr2:179472311;179472310;179472309 |
Novex-1 | 8762 | 26509;26510;26511 | chr2:178607584;178607583;178607582 | chr2:179472311;179472310;179472309 |
Novex-2 | 8829 | 26710;26711;26712 | chr2:178607584;178607583;178607582 | chr2:179472311;179472310;179472309 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1238325853 | -1.205 | 1.0 | D | 0.815 | 0.667 | 0.589813230912 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs1238325853 | -1.205 | 1.0 | D | 0.815 | 0.667 | 0.589813230912 | gnomAD-4.0.0 | 1.59243E-06 | None | None | None | None | I | None | 0 | 2.28686E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.7819 | likely_pathogenic | 0.8182 | pathogenic | -1.215 | Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.54163966 | None | None | I |
P/C | 0.9806 | likely_pathogenic | 0.9831 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
P/D | 0.9984 | likely_pathogenic | 0.9989 | pathogenic | -1.134 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
P/E | 0.9949 | likely_pathogenic | 0.9964 | pathogenic | -1.217 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
P/F | 0.9984 | likely_pathogenic | 0.999 | pathogenic | -1.347 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
P/G | 0.9811 | likely_pathogenic | 0.987 | pathogenic | -1.425 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
P/H | 0.9941 | likely_pathogenic | 0.9964 | pathogenic | -1.013 | Destabilizing | 1.0 | D | 0.767 | deleterious | D | 0.563733615 | None | None | I |
P/I | 0.9813 | likely_pathogenic | 0.9849 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
P/K | 0.997 | likely_pathogenic | 0.9981 | pathogenic | -0.87 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
P/L | 0.9495 | likely_pathogenic | 0.9593 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.81 | deleterious | D | 0.558663824 | None | None | I |
P/M | 0.9904 | likely_pathogenic | 0.9933 | pathogenic | -0.462 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
P/N | 0.9978 | likely_pathogenic | 0.9985 | pathogenic | -0.598 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
P/Q | 0.9889 | likely_pathogenic | 0.9923 | pathogenic | -0.907 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
P/R | 0.9894 | likely_pathogenic | 0.9924 | pathogenic | -0.295 | Destabilizing | 1.0 | D | 0.826 | deleterious | D | 0.574747525 | None | None | I |
P/S | 0.974 | likely_pathogenic | 0.9809 | pathogenic | -1.022 | Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.5477425 | None | None | I |
P/T | 0.9648 | likely_pathogenic | 0.9755 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.818 | deleterious | D | 0.562719657 | None | None | I |
P/V | 0.9543 | likely_pathogenic | 0.9622 | pathogenic | -0.888 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
P/W | 0.9992 | likely_pathogenic | 0.9995 | pathogenic | -1.429 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
P/Y | 0.9985 | likely_pathogenic | 0.9991 | pathogenic | -1.128 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.