Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17703 | 53332;53333;53334 | chr2:178607581;178607580;178607579 | chr2:179472308;179472307;179472306 |
N2AB | 16062 | 48409;48410;48411 | chr2:178607581;178607580;178607579 | chr2:179472308;179472307;179472306 |
N2A | 15135 | 45628;45629;45630 | chr2:178607581;178607580;178607579 | chr2:179472308;179472307;179472306 |
N2B | 8638 | 26137;26138;26139 | chr2:178607581;178607580;178607579 | chr2:179472308;179472307;179472306 |
Novex-1 | 8763 | 26512;26513;26514 | chr2:178607581;178607580;178607579 | chr2:179472308;179472307;179472306 |
Novex-2 | 8830 | 26713;26714;26715 | chr2:178607581;178607580;178607579 | chr2:179472308;179472307;179472306 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.011 | D | 0.149 | 0.198 | 0.229924730088 | gnomAD-4.0.0 | 1.59233E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88338E-05 | 0 | 0 | 0 | 0 |
T/S | None | None | 0.123 | N | 0.148 | 0.091 | 0.204665344411 | gnomAD-4.0.0 | 1.59233E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77423E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0783 | likely_benign | 0.0765 | benign | -0.401 | Destabilizing | 0.011 | N | 0.149 | neutral | D | 0.523034552 | None | None | I |
T/C | 0.4549 | ambiguous | 0.4538 | ambiguous | -0.262 | Destabilizing | 0.999 | D | 0.461 | neutral | None | None | None | None | I |
T/D | 0.2664 | likely_benign | 0.2493 | benign | 0.074 | Stabilizing | 0.919 | D | 0.385 | neutral | None | None | None | None | I |
T/E | 0.1511 | likely_benign | 0.1445 | benign | 0.017 | Stabilizing | 0.919 | D | 0.365 | neutral | None | None | None | None | I |
T/F | 0.2975 | likely_benign | 0.2903 | benign | -0.778 | Destabilizing | 0.996 | D | 0.553 | neutral | None | None | None | None | I |
T/G | 0.2352 | likely_benign | 0.2332 | benign | -0.57 | Destabilizing | 0.702 | D | 0.415 | neutral | None | None | None | None | I |
T/H | 0.2496 | likely_benign | 0.2403 | benign | -0.85 | Destabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | I |
T/I | 0.164 | likely_benign | 0.1563 | benign | -0.069 | Destabilizing | 0.968 | D | 0.397 | neutral | N | 0.486239442 | None | None | I |
T/K | 0.1382 | likely_benign | 0.1376 | benign | -0.471 | Destabilizing | 0.896 | D | 0.391 | neutral | N | 0.48033978 | None | None | I |
T/L | 0.1091 | likely_benign | 0.1069 | benign | -0.069 | Destabilizing | 0.919 | D | 0.34 | neutral | None | None | None | None | I |
T/M | 0.1072 | likely_benign | 0.1067 | benign | 0.061 | Stabilizing | 0.999 | D | 0.461 | neutral | None | None | None | None | I |
T/N | 0.1172 | likely_benign | 0.1185 | benign | -0.26 | Destabilizing | 0.919 | D | 0.339 | neutral | None | None | None | None | I |
T/P | 0.2967 | likely_benign | 0.3435 | ambiguous | -0.15 | Destabilizing | 0.984 | D | 0.403 | neutral | N | 0.518840328 | None | None | I |
T/Q | 0.1442 | likely_benign | 0.1431 | benign | -0.456 | Destabilizing | 0.988 | D | 0.444 | neutral | None | None | None | None | I |
T/R | 0.1388 | likely_benign | 0.1409 | benign | -0.196 | Destabilizing | 0.984 | D | 0.411 | neutral | D | 0.524920063 | None | None | I |
T/S | 0.1067 | likely_benign | 0.0997 | benign | -0.465 | Destabilizing | 0.123 | N | 0.148 | neutral | N | 0.503368568 | None | None | I |
T/V | 0.1187 | likely_benign | 0.1104 | benign | -0.15 | Destabilizing | 0.851 | D | 0.289 | neutral | None | None | None | None | I |
T/W | 0.6231 | likely_pathogenic | 0.6228 | pathogenic | -0.789 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
T/Y | 0.3 | likely_benign | 0.3097 | benign | -0.516 | Destabilizing | 0.996 | D | 0.557 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.