Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17704 | 53335;53336;53337 | chr2:178607578;178607577;178607576 | chr2:179472305;179472304;179472303 |
N2AB | 16063 | 48412;48413;48414 | chr2:178607578;178607577;178607576 | chr2:179472305;179472304;179472303 |
N2A | 15136 | 45631;45632;45633 | chr2:178607578;178607577;178607576 | chr2:179472305;179472304;179472303 |
N2B | 8639 | 26140;26141;26142 | chr2:178607578;178607577;178607576 | chr2:179472305;179472304;179472303 |
Novex-1 | 8764 | 26515;26516;26517 | chr2:178607578;178607577;178607576 | chr2:179472305;179472304;179472303 |
Novex-2 | 8831 | 26716;26717;26718 | chr2:178607578;178607577;178607576 | chr2:179472305;179472304;179472303 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.042 | N | 0.497 | 0.115 | None | gnomAD-4.0.0 | 4.10637E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39823E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2433 | likely_benign | 0.1748 | benign | -0.682 | Destabilizing | 0.104 | N | 0.528 | neutral | None | None | None | None | I |
K/C | 0.492 | ambiguous | 0.3867 | ambiguous | -0.645 | Destabilizing | 0.958 | D | 0.777 | deleterious | None | None | None | None | I |
K/D | 0.8082 | likely_pathogenic | 0.7611 | pathogenic | -0.16 | Destabilizing | 0.22 | N | 0.614 | neutral | None | None | None | None | I |
K/E | 0.2666 | likely_benign | 0.2052 | benign | -0.04 | Destabilizing | 0.042 | N | 0.497 | neutral | N | 0.492268927 | None | None | I |
K/F | 0.7612 | likely_pathogenic | 0.6451 | pathogenic | -0.401 | Destabilizing | 0.22 | N | 0.749 | deleterious | None | None | None | None | I |
K/G | 0.5673 | likely_pathogenic | 0.4655 | ambiguous | -1.06 | Destabilizing | 0.22 | N | 0.659 | neutral | None | None | None | None | I |
K/H | 0.443 | ambiguous | 0.3846 | ambiguous | -1.466 | Destabilizing | 0.667 | D | 0.688 | prob.neutral | None | None | None | None | I |
K/I | 0.1219 | likely_benign | 0.0754 | benign | 0.303 | Stabilizing | None | N | 0.466 | neutral | N | 0.317812031 | None | None | I |
K/L | 0.2408 | likely_benign | 0.1733 | benign | 0.303 | Stabilizing | None | N | 0.439 | neutral | None | None | None | None | I |
K/M | 0.128 | likely_benign | 0.0931 | benign | 0.259 | Stabilizing | 0.497 | N | 0.686 | prob.neutral | None | None | None | None | I |
K/N | 0.5541 | ambiguous | 0.485 | ambiguous | -0.478 | Destabilizing | 0.175 | N | 0.527 | neutral | N | 0.473683167 | None | None | I |
K/P | 0.6993 | likely_pathogenic | 0.6593 | pathogenic | 0.005 | Stabilizing | 0.667 | D | 0.669 | neutral | None | None | None | None | I |
K/Q | 0.178 | likely_benign | 0.1405 | benign | -0.554 | Destabilizing | 0.175 | N | 0.533 | neutral | N | 0.492268927 | None | None | I |
K/R | 0.0993 | likely_benign | 0.0801 | benign | -0.636 | Destabilizing | None | N | 0.213 | neutral | N | 0.492268927 | None | None | I |
K/S | 0.4562 | ambiguous | 0.3653 | ambiguous | -1.178 | Destabilizing | 0.104 | N | 0.501 | neutral | None | None | None | None | I |
K/T | 0.1072 | likely_benign | 0.0795 | benign | -0.842 | Destabilizing | 0.081 | N | 0.56 | neutral | N | 0.43589557 | None | None | I |
K/V | 0.1228 | likely_benign | 0.0809 | benign | 0.005 | Stabilizing | 0.025 | N | 0.558 | neutral | None | None | None | None | I |
K/W | 0.8192 | likely_pathogenic | 0.7361 | pathogenic | -0.258 | Destabilizing | 0.958 | D | 0.769 | deleterious | None | None | None | None | I |
K/Y | 0.6196 | likely_pathogenic | 0.5506 | ambiguous | 0.049 | Stabilizing | 0.859 | D | 0.739 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.