Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 17710 | 53353;53354;53355 | chr2:178607560;178607559;178607558 | chr2:179472287;179472286;179472285 |
N2AB | 16069 | 48430;48431;48432 | chr2:178607560;178607559;178607558 | chr2:179472287;179472286;179472285 |
N2A | 15142 | 45649;45650;45651 | chr2:178607560;178607559;178607558 | chr2:179472287;179472286;179472285 |
N2B | 8645 | 26158;26159;26160 | chr2:178607560;178607559;178607558 | chr2:179472287;179472286;179472285 |
Novex-1 | 8770 | 26533;26534;26535 | chr2:178607560;178607559;178607558 | chr2:179472287;179472286;179472285 |
Novex-2 | 8837 | 26734;26735;26736 | chr2:178607560;178607559;178607558 | chr2:179472287;179472286;179472285 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs749551895 | -0.084 | None | N | 0.135 | 0.104 | 0.0666544352282 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14811E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs749551895 | -0.084 | None | N | 0.135 | 0.104 | 0.0666544352282 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs749551895 | -0.084 | None | N | 0.135 | 0.104 | 0.0666544352282 | gnomAD-4.0.0 | 6.57964E-06 | None | None | None | None | N | None | 2.41313E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1551 | likely_benign | 0.1738 | benign | 0.014 | Stabilizing | 0.052 | N | 0.397 | neutral | N | 0.478277257 | None | None | N |
E/C | 0.7666 | likely_pathogenic | 0.8231 | pathogenic | -0.126 | Destabilizing | 0.935 | D | 0.505 | neutral | None | None | None | None | N |
E/D | 0.0829 | likely_benign | 0.0787 | benign | -0.295 | Destabilizing | None | N | 0.135 | neutral | N | 0.422863904 | None | None | N |
E/F | 0.7325 | likely_pathogenic | 0.7829 | pathogenic | -0.05 | Destabilizing | 0.791 | D | 0.463 | neutral | None | None | None | None | N |
E/G | 0.1114 | likely_benign | 0.1341 | benign | -0.086 | Destabilizing | None | N | 0.284 | neutral | N | 0.334775199 | None | None | N |
E/H | 0.5483 | ambiguous | 0.6026 | pathogenic | 0.511 | Stabilizing | 0.555 | D | 0.383 | neutral | None | None | None | None | N |
E/I | 0.4364 | ambiguous | 0.4735 | ambiguous | 0.218 | Stabilizing | 0.555 | D | 0.466 | neutral | None | None | None | None | N |
E/K | 0.2498 | likely_benign | 0.2863 | benign | 0.468 | Stabilizing | 0.117 | N | 0.443 | neutral | N | 0.438084073 | None | None | N |
E/L | 0.4631 | ambiguous | 0.5141 | ambiguous | 0.218 | Stabilizing | 0.38 | N | 0.482 | neutral | None | None | None | None | N |
E/M | 0.5095 | ambiguous | 0.5418 | ambiguous | 0.035 | Stabilizing | 0.935 | D | 0.447 | neutral | None | None | None | None | N |
E/N | 0.2025 | likely_benign | 0.2126 | benign | 0.231 | Stabilizing | 0.081 | N | 0.403 | neutral | None | None | None | None | N |
E/P | 0.5359 | ambiguous | 0.5944 | pathogenic | 0.167 | Stabilizing | 0.555 | D | 0.435 | neutral | None | None | None | None | N |
E/Q | 0.2283 | likely_benign | 0.2455 | benign | 0.242 | Stabilizing | 0.117 | N | 0.438 | neutral | N | 0.487339457 | None | None | N |
E/R | 0.389 | ambiguous | 0.4444 | ambiguous | 0.634 | Stabilizing | 0.38 | N | 0.416 | neutral | None | None | None | None | N |
E/S | 0.1932 | likely_benign | 0.2139 | benign | 0.106 | Stabilizing | 0.081 | N | 0.401 | neutral | None | None | None | None | N |
E/T | 0.2162 | likely_benign | 0.2288 | benign | 0.2 | Stabilizing | 0.149 | N | 0.433 | neutral | None | None | None | None | N |
E/V | 0.2722 | likely_benign | 0.3071 | benign | 0.167 | Stabilizing | 0.484 | N | 0.456 | neutral | N | 0.512813905 | None | None | N |
E/W | 0.8515 | likely_pathogenic | 0.8967 | pathogenic | -0.021 | Destabilizing | 0.935 | D | 0.551 | neutral | None | None | None | None | N |
E/Y | 0.5658 | likely_pathogenic | 0.6298 | pathogenic | 0.166 | Stabilizing | 0.791 | D | 0.45 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.